Detailed information NTG0584518

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: KU507_RS03240
• Genome accession: NZ_CP077885
• Coordinates: 605373..605843 (+)
• Length: 156 a.a.
• NCBI ID: WP_000934770.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 355
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 600373..610843

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KU507_RS03205 (KU507_03185)	-	600800..601021 (+)	222	WP_000594790.1	hypothetical protein	-
KU507_RS03210 (KU507_03190)	-	601014..601175 (+)	162	WP_050956528.1	DUF1270 domain-containing protein	-
KU507_RS03215 (KU507_03195)	-	601268..601528 (+)	261	WP_000291489.1	DUF1108 family protein	-
KU507_RS03220 (KU507_03200)	-	601537..601800 (+)	264	WP_001205732.1	hypothetical protein	-
KU507_RS03225 (KU507_03205)	-	601809..603752 (+)	1944	WP_000700562.1	AAA family ATPase	-
KU507_RS03230 (KU507_03210)	-	603754..604674 (+)	921	WP_000138481.1	recombinase RecT	-
KU507_RS03235 (KU507_03215)	-	604755..605372 (+)	618	WP_071621397.1	MBL fold metallo-hydrolase	-
KU507_RS03240 (KU507_03220)	ssbA	605373..605843 (+)	471	WP_000934770.1	single-stranded DNA-binding protein	Machinery gene
KU507_RS03245 (KU507_03225)	-	605873..606757 (+)	885	WP_000148301.1	DnaD domain protein	-
KU507_RS03250 (KU507_03230)	-	606764..606982 (+)	219	WP_000338528.1	hypothetical protein	-
KU507_RS03255 (KU507_03235)	-	606991..607395 (+)	405	WP_000401964.1	RusA family crossover junction endodeoxyribonuclease	-
KU507_RS03260 (KU507_03240)	-	607408..607776 (+)	369	WP_000101274.1	SA1788 family PVL leukocidin-associated protein	-
KU507_RS03265 (KU507_03245)	-	607780..608022 (+)	243	WP_000131366.1	SAV1978 family virulence-associated passenger protein	-
KU507_RS03270 (KU507_03250)	-	608087..608536 (+)	450	WP_000982711.1	YopX family protein	-
KU507_RS03275 (KU507_03255)	-	608533..609042 (+)	510	WP_001105598.1	hypothetical protein	-
KU507_RS03280 (KU507_03260)	-	609039..609449 (+)	411	WP_000197967.1	hypothetical protein	-
KU507_RS03285 (KU507_03265)	-	609442..609978 (+)	537	WP_001066444.1	dUTPase	-
KU507_RS03290 (KU507_03270)	-	610015..610221 (+)	207	WP_000195820.1	DUF1381 domain-containing protein	-
KU507_RS03295 (KU507_03275)	rinB	610218..610367 (+)	150	WP_000595265.1	transcriptional activator RinB	-
KU507_RS03300 (KU507_03280)	-	610367..610567 (+)	201	WP_000265041.1	DUF1514 family protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17713.63 Da
• Isoelectric Point: 5.2672

>NTDB_id=584518 KU507_RS03240 WP_000934770.1 605373..605843(+) (ssbA) [Staphylococcus aureus strain 355]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANVPIEIDDNDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=584518 KU507_RS03240 WP_000934770.1 605373..605843(+) (ssbA) [Staphylococcus aureus strain 355]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGTTCCGATTGAAATAGATGACAATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.367	100	0.628
ssb	Latilactobacillus sakei subsp. sakei 23K	50.588	100	0.551
ssbB	Bacillus subtilis subsp. subtilis str. 168	59.434	67.949	0.404
ssb	Glaesserella parasuis strain SC1401	32.203	100	0.365