Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   I872_RS04845 Genome accession   NC_021175
Coordinates   981209..983173 (-) Length   654 a.a.
NCBI ID   WP_015605026.1    Uniprot ID   A0A512AAG4
Organism   Streptococcus cristatus AS 1.3089     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 976209..988173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I872_RS04820 (I872_04830) gyrA 976556..979006 (-) 2451 WP_015605022.1 DNA gyrase subunit A -
  I872_RS04825 (I872_04835) - 979213..980199 (+) 987 WP_015605023.1 L-lactate dehydrogenase -
  I872_RS04830 (I872_04840) - 980237..980494 (-) 258 Protein_939 NUDIX hydrolase -
  I872_RS04835 (I872_04845) - 980664..980807 (-) 144 Protein_940 NUDIX hydrolase -
  I872_RS04845 (I872_04850) amiA 981209..983173 (-) 1965 WP_015605026.1 peptide ABC transporter substrate-binding protein Regulator
  I872_RS04850 (I872_04855) - 983443..983697 (+) 255 WP_015605027.1 metal-sensitive transcriptional regulator -
  I872_RS04855 (I872_04860) - 983898..984191 (-) 294 WP_015605028.1 rhodanese-like domain-containing protein -
  I872_RS04860 (I872_04865) - 984188..985840 (-) 1653 WP_015605029.1 FAD-dependent oxidoreductase -
  I872_RS04865 (I872_04870) - 985854..986162 (-) 309 WP_015605030.1 rhodanese-like domain-containing protein -
  I872_RS04870 (I872_04875) rpmA 986293..986586 (-) 294 WP_003032879.1 50S ribosomal protein L27 -
  I872_RS04875 (I872_04880) - 986604..986948 (-) 345 WP_015605031.1 ribosomal-processing cysteine protease Prp -
  I872_RS04880 (I872_04885) rplU 986964..987278 (-) 315 WP_015605032.1 50S ribosomal protein L21 -
  I872_RS04885 (I872_04890) - 987583..988107 (-) 525 WP_015605033.1 hypothetical protein -

Sequence

Protein


Download         Length: 654 a.a.        Molecular weight: 72723.80 Da        Isoelectric Point: 4.7515

>NTDB_id=58446 I872_RS04845 WP_015605026.1 981209..983173(-) (amiA) [Streptococcus cristatus AS 1.3089]
MKVSKMLLATGVVLSAGVFLSACGKSSSSTSTYSYVYASDPDSLNYLTTNRATTSDVITNLVDGLLENDEYGNLVPSLAE
SWTVSQDGLTYTYKLRKDAKWFNVDGEEVASVKAQDFVTGLKYVADQKSEALYLIQDSISGLDAYVKGDEKDFSKVGVKA
IDDYTVQYTLTRPEPYWNSKTTNNILFPVNEEFLKSKGKDFGSVDPSSILYNGPFLLKSLTSKSSMEFVKNPNYYDKDKV
SLEDVKLTYYDGSDQESLIRNFSDGAYSGARLYPNTSGFATVKKKYADNILYSPQDATSYYFNFNFNRQSYNHTSKTSDD
QKNATKEAVLNKDFRQAVNFALDRTAYGAQSNGEDGATKQLRNTLVPPTFVQIGDQTFGQVVASKLVNYGTEWANVDLTD
AQDAYYNPDKAKAKFAKAKEALEAKGVQFPIHLDLPVDQADKVGIQWASSVKQSIESTLGAENVVIDLQKISVDDLNNVT
YFANTAAQKDYDFYTGGWSADYQDPSTYLDTLNVNNGASLQNFGFEPGQDMDKMKDLGLDTYTKMLEEANAETKDVKVRY
EKYADAQAWLLDSGIIMPTISGGGSPSVSKSKPFSRAYSLVGIKGSGFNFKYTKLRSEIVTTKEYEEAKKKWQEKTLESN
QKAQEELADHIEKK

Nucleotide


Download         Length: 1965 bp        

>NTDB_id=58446 I872_RS04845 WP_015605026.1 981209..983173(-) (amiA) [Streptococcus cristatus AS 1.3089]
ATGAAAGTATCAAAAATGCTTTTAGCTACTGGAGTGGTACTTAGTGCAGGCGTGTTCTTGTCAGCTTGTGGCAAATCCTC
ATCTAGTACATCAACGTATTCTTATGTTTATGCCAGCGATCCAGACAGCTTGAACTACCTGACCACTAACCGTGCAACTA
CATCAGACGTTATTACAAACCTTGTAGATGGTCTTTTGGAAAATGATGAATATGGAAATCTAGTTCCTTCTCTTGCGGAA
TCATGGACAGTTTCCCAAGACGGCCTGACTTACACATATAAGCTTCGTAAGGATGCTAAGTGGTTCAATGTTGATGGCGA
AGAAGTTGCAAGTGTGAAAGCTCAAGACTTTGTGACTGGACTTAAATATGTTGCTGACCAAAAGTCTGAAGCCCTTTACC
TGATTCAGGACTCGATTAGTGGCTTAGATGCCTATGTCAAAGGCGACGAAAAAGACTTTTCAAAAGTCGGGGTGAAGGCA
ATAGATGATTATACTGTTCAATACACGCTGACACGCCCAGAGCCTTATTGGAACTCTAAAACTACGAATAATATCTTGTT
CCCTGTCAATGAAGAATTTTTGAAGTCTAAAGGAAAAGATTTTGGTTCTGTTGATCCATCAAGTATTCTTTACAACGGTC
CTTTCCTTTTGAAATCTTTGACTTCTAAATCGTCTATGGAATTCGTTAAAAATCCAAATTATTACGATAAAGACAAGGTC
AGTCTAGAAGATGTCAAATTAACCTACTATGATGGGTCAGACCAAGAATCTTTAATTCGCAACTTCAGCGATGGTGCTTA
TAGCGGTGCTCGTCTCTATCCAAATACTTCAGGATTTGCAACAGTTAAGAAAAAATATGCGGATAATATCCTTTACAGCC
CGCAGGATGCGACCTCATATTATTTTAATTTCAACTTCAATCGTCAATCATACAATCACACTTCCAAAACAAGTGATGAT
CAGAAGAATGCAACAAAAGAAGCAGTCCTAAATAAGGACTTCCGTCAGGCTGTCAATTTTGCCCTTGATCGGACTGCCTA
TGGTGCACAAAGTAATGGTGAAGACGGAGCTACCAAGCAGTTAAGAAATACGCTTGTTCCACCAACATTTGTTCAAATCG
GCGATCAAACATTTGGGCAAGTTGTTGCTTCTAAACTAGTAAATTACGGCACAGAATGGGCCAACGTTGATCTCACTGAC
GCTCAAGATGCCTACTATAACCCAGACAAAGCCAAGGCAAAATTTGCCAAGGCTAAGGAAGCTTTGGAAGCTAAGGGAGT
TCAATTCCCAATTCATTTGGACCTTCCTGTGGACCAGGCTGATAAGGTGGGAATCCAATGGGCAAGCTCAGTGAAACAAT
CCATCGAATCAACCTTGGGTGCAGAAAATGTAGTTATTGACTTGCAGAAGATTAGTGTAGATGATTTGAATAATGTCACC
TATTTTGCCAATACTGCAGCTCAAAAAGATTATGACTTCTACACAGGCGGCTGGTCAGCTGACTATCAAGATCCATCTAC
CTACTTAGATACTCTAAATGTAAATAATGGTGCTAGCTTGCAAAACTTTGGTTTTGAGCCAGGCCAAGATATGGACAAGA
TGAAAGATCTGGGCTTGGATACTTATACCAAGATGTTAGAAGAGGCAAATGCTGAAACAAAAGATGTGAAAGTTCGCTAT
GAAAAATATGCGGATGCGCAAGCTTGGTTGCTTGATAGCGGCATTATCATGCCGACCATTTCAGGAGGCGGTAGTCCTTC
TGTAAGTAAGTCCAAACCTTTCAGTCGTGCTTACTCACTGGTTGGAATCAAGGGATCTGGCTTTAACTTTAAATATACCA
AGCTCAGAAGCGAGATTGTAACGACCAAAGAATATGAAGAAGCTAAGAAAAAATGGCAAGAAAAAACATTGGAATCTAAC
CAAAAAGCCCAAGAAGAACTAGCAGATCATATCGAAAAGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(74-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A512AAG4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

54.878

100

0.55
  amiA3 Streptococcus thermophilus LMG 18311

54.186

100

0.544
  amiA3 Streptococcus thermophilus LMD-9

54.186

100

0.544

Multiple sequence alignment