Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AVCA_RS01505 Genome accession   NC_021149
Coordinates   296352..296759 (+) Length   135 a.a.
NCBI ID   WP_012699006.1    Uniprot ID   M9YDI7
Organism   Azotobacter vinelandii CA     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 291352..301759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AVCA_RS01480 (AvCA_03130) pyrR 292549..293052 (-) 504 WP_012699001.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AVCA_RS01485 (AvCA_03140) ruvX 293096..293524 (-) 429 WP_012699002.1 Holliday junction resolvase RuvX -
  AVCA_RS01490 (AvCA_03150) - 293521..294087 (-) 567 WP_373860935.1 YqgE/AlgH family protein -
  AVCA_RS01495 (AvCA_03160) - 294181..295074 (-) 894 WP_012699004.1 energy transducer TonB -
  AVCA_RS01500 (AvCA_03170) gshB 295168..296124 (-) 957 WP_012699005.1 glutathione synthase -
  AVCA_RS01505 (AvCA_03180) pilG 296352..296759 (+) 408 WP_012699006.1 twitching motility response regulator PilG Regulator
  AVCA_RS01510 (AvCA_03190) - 297112..297831 (-) 720 WP_012699007.1 16S rRNA (uracil(1498)-N(3))-methyltransferase -
  AVCA_RS01515 (AvCA_03200) - 297974..298513 (+) 540 WP_012699008.1 DUF3087 domain-containing protein -
  AVCA_RS01520 (AvCA_03210) - 298586..299992 (-) 1407 WP_012699009.1 adenosylmethionine--8-amino-7-oxononanoate transaminase -
  AVCA_RS01525 (AvCA_03220) - 300152..301666 (+) 1515 WP_231876177.1 flavin monoamine oxidase family protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14855.27 Da        Isoelectric Point: 7.3231

>NTDB_id=58321 AVCA_RS01505 WP_012699006.1 296352..296759(+) (pilG) [Azotobacter vinelandii CA]
MEHHSDGLKVMVIDDSKMIRRTAETLLKRVGCEVITAVDGFDALAKIADGHPRIIFVDIAMPRLDGYQTCALIKNNSAFK
STPVIMLSSRDGLFDKAKGRIVGSEQYLTKPFGKEELLGAIRAHVPDFVPLEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=58321 AVCA_RS01505 WP_012699006.1 296352..296759(+) (pilG) [Azotobacter vinelandii CA]
ATGGAACATCATTCCGACGGTTTGAAGGTCATGGTGATCGACGACTCAAAGATGATTCGTCGCACTGCGGAAACCCTGCT
GAAGAGGGTGGGGTGCGAGGTCATCACCGCCGTGGACGGCTTCGATGCCCTGGCCAAGATCGCCGACGGTCATCCGCGGA
TCATCTTCGTCGACATCGCGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCCTGATCAAGAACAACAGCGCATTCAAG
TCCACGCCGGTGATCATGCTGTCCTCCAGGGACGGCCTGTTCGACAAGGCCAAGGGACGTATCGTCGGTTCCGAGCAGTA
TCTGACCAAGCCCTTCGGCAAGGAAGAACTGCTGGGCGCGATCAGGGCCCACGTGCCCGATTTCGTCCCGCTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M9YDI7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

92.593

0.689

Multiple sequence alignment