Detailed information NTG0058224

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: RVR_RS03995
• Genome accession: NZ_AP018365
• Coordinates: 960016..961095 (-)
• Length: 359 a.a.
• NCBI ID: WP_202232518.1
• Uniprot ID: A0A7U3UNV2
• Organism: Streptomyces sp. SN-593
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 955016..966095

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
-	ruvB	960016..961095 (-)	1080	-	-	Machinery gene

Sequence

Protein

• Length: 359 a.a.
• Molecular weight: 38211.55 Da
• Isoelectric Point: 5.1632

>NTDB_id=58224 RVR_RS03995 WP_202232518.1 960016..961095(-) (ruvB) [Streptomyces sp. SN-593]
MNWDDAPADTPDRLVGSAADREDQAVEAALRPKELDEFIGQERVRQQLDLVLKAARQRGATADHVLLSGAPGLGKTTLSM
IIAAEMSAPIRITSGPAIQHAGDLAAILSSLTEGEVLFLDEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELP
PFTLVGATTRAGLLPPPLRDRFGFTGHMEFYAPAELERVVHRSAGLLDVAIDTDGAAEIAGRSRGTPRIANRLLRRVRDY
AQVRADGAVTRETAARALEVYEVDARGLDRLDRAVLHALLKLFGGGPVGLSTLAVAVGEERETVEEVAEPFLVREGLLAR
TPRGRVATPAAWSHLGLVPPPQGGGTSQGGPGQTGLFGA

Nucleotide

• Length: 1080 bp

>NTDB_id=58224 RVR_RS03995 WP_202232518.1 960016..961095(-) (ruvB) [Streptomyces sp. SN-593]
ATGAACTGGGACGACGCCCCCGCCGACACACCCGACCGGCTGGTCGGGTCGGCCGCCGACCGCGAGGACCAGGCGGTCGA
GGCGGCGCTGCGGCCCAAGGAACTCGACGAGTTCATCGGCCAGGAGCGCGTCCGCCAGCAGCTCGACCTGGTGCTCAAGG
CCGCCCGCCAGCGGGGCGCCACCGCCGACCACGTACTCCTCTCGGGTGCACCCGGACTCGGCAAGACCACTCTTTCGATG
ATCATCGCCGCCGAGATGTCGGCGCCGATCCGGATCACCTCGGGCCCGGCCATCCAGCACGCCGGCGACCTCGCGGCCAT
CCTCTCCTCGCTCACCGAGGGCGAGGTGCTCTTCCTCGACGAGATCCACCGGATGTCCCGTCCGGCCGAGGAGATGCTCT
ACATGGCGATGGAGGACTTCCGGGTCGACGTGATCGTGGGCAAGGGCCCGGGCGCGACCGCGATCCCGCTGGAGCTGCCG
CCCTTCACCCTGGTCGGGGCCACCACCCGGGCCGGCCTGCTGCCGCCGCCGCTGCGCGACCGCTTCGGCTTCACCGGCCA
CATGGAGTTCTACGCCCCCGCCGAGCTGGAGCGGGTCGTGCACCGCTCGGCCGGCCTGCTGGACGTGGCGATCGACACCG
ACGGAGCCGCCGAGATCGCCGGCCGCTCCCGCGGCACCCCCCGCATCGCCAACCGGCTGCTGCGCCGGGTGCGCGACTAC
GCCCAGGTGCGCGCCGACGGCGCGGTCACCCGCGAGACCGCCGCCCGGGCGCTGGAGGTCTACGAGGTCGACGCCCGCGG
CCTGGACCGGCTGGACCGGGCGGTGCTGCACGCGCTGCTGAAGCTCTTCGGCGGCGGCCCGGTCGGCCTGTCCACGCTCG
CCGTCGCGGTGGGGGAGGAGCGGGAGACCGTCGAGGAGGTCGCAGAACCGTTCCTGGTGCGGGAGGGGCTGCTCGCCCGG
ACGCCCAGGGGCCGGGTGGCGACGCCCGCGGCCTGGTCCCACCTGGGCCTCGTGCCGCCCCCGCAGGGCGGCGGGACGAG
TCAGGGCGGACCCGGACAGACCGGCCTGTTCGGTGCCTGA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (30-188)

• RuvB AAA lid domain (AAA_lid_4) (191-264)

• RuvB C-terminal winged helix domain (WHD_RuvB) (266-335)

3D structure

• AlphaFold DB: A0A7U3UNV2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	53.495	91.643	0.49
ruvB	Streptococcus pneumoniae TIGR4	51.235	90.251	0.462
ruvB	Streptococcus pneumoniae R6	51.235	90.251	0.462
ruvB	Streptococcus pneumoniae D39	51.235	90.251	0.462
ruvB	Synechocystis sp. PCC 6803	52.229	87.465	0.457
ruvB	Helicobacter pylori 26695	49.518	86.63	0.429