Detailed information NTG0581892

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: KTP57_RS04625
• Genome accession: NZ_CP077654
• Coordinates: 929323..930426 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain S4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 924323..935426

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KTP57_RS04595 (KTP57_04565)	-	924359..925309 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
KTP57_RS04600 (KTP57_04570)	-	925303..925788 (+)	486	Protein_901	phosphonate ABC transporter ATP-binding protein	-
KTP57_RS04605 (KTP57_04575)	phnE	925785..926675 (+)	891	WP_033446133.1	phosphonate ABC transporter, permease protein PhnE	-
KTP57_RS04610 (KTP57_04580)	phnE	926672..927493 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
KTP57_RS04620 (KTP57_04590)	-	927678..929276 (+)	1599	Protein_904	CYTH and CHAD domain-containing protein	-
KTP57_RS04625 (KTP57_04595)	pilA	929323..930426 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
KTP57_RS04630 (KTP57_04600)	rsmD	930502..931122 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
KTP57_RS04635 (KTP57_04605)	coaD	931143..931652 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
KTP57_RS04640 (KTP57_04610)	-	931707..931958 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
KTP57_RS04645 (KTP57_04615)	-	932022..933155 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
KTP57_RS04650 (KTP57_04620)	-	933163..933549 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=581892 KTP57_RS04625 WP_023853086.1 929323..930426(-) (pilA) [Bordetella pertussis strain S4]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=581892 KTP57_RS04625 WP_023853086.1 929323..930426(-) (pilA) [Bordetella pertussis strain S4]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507