Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   KTN75_RS07520 Genome accession   NZ_CP077635
Coordinates   1444190..1444705 (-) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni strain R19.1007     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1439190..1449705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTN75_RS07505 (KTN75_07505) - 1439291..1441108 (-) 1818 WP_217295923.1 motility associated factor glycosyltransferase family protein -
  KTN75_RS07510 (KTN75_07510) - 1441105..1442928 (-) 1824 WP_217295924.1 motility associated factor glycosyltransferase family protein -
  KTN75_RS07515 (KTN75_07515) - 1442939..1444190 (-) 1252 Protein_1485 DUF2920 family protein -
  KTN75_RS07520 (KTN75_07520) ctsG 1444190..1444705 (-) 516 WP_002799196.1 type II secretion system protein Machinery gene
  KTN75_RS07525 (KTN75_07525) tsaD 1444706..1445713 (-) 1008 WP_002934877.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  KTN75_RS07530 (KTN75_07530) - 1445710..1447104 (-) 1395 WP_002934878.1 M99 family carboxypeptidase catalytic domain-containing protein -
  KTN75_RS07535 (KTN75_07535) dxr 1447106..1448176 (-) 1071 WP_002860792.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  KTN75_RS07540 (KTN75_07540) cdsA 1448173..1448898 (-) 726 WP_002875974.1 phosphatidate cytidylyltransferase -
  KTN75_RS07545 (KTN75_07545) - 1448907..1449245 (-) 339 WP_217295925.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=581779 KTN75_RS07520 WP_002799196.1 1444190..1444705(-) (ctsG) [Campylobacter jejuni strain R19.1007]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=581779 KTN75_RS07520 WP_002799196.1 1444190..1444705(-) (ctsG) [Campylobacter jejuni strain R19.1007]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGTTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942