Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   JGX27_RS08310 Genome accession   NZ_CP077423
Coordinates   1658535..1659536 (-) Length   333 a.a.
NCBI ID   WP_009854678.1    Uniprot ID   A0A139R5I1
Organism   Streptococcus gallolyticus subsp. gallolyticus TX20005     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1653535..1664536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JGX27_RS08295 (JGX27_08295) thrS 1653809..1655755 (-) 1947 WP_009854675.1 threonine--tRNA ligase -
  JGX27_RS08300 (JGX27_08300) - 1656105..1657439 (-) 1335 WP_009854676.1 glycosyltransferase family 4 protein -
  JGX27_RS08305 (JGX27_08305) - 1657441..1658439 (-) 999 WP_009854677.1 glycosyltransferase family 4 protein -
  JGX27_RS08310 (JGX27_08310) ccpA 1658535..1659536 (-) 1002 WP_009854678.1 catabolite control protein A Regulator
  JGX27_RS08315 (JGX27_08315) - 1659866..1660951 (+) 1086 WP_009854679.1 Xaa-Pro peptidase family protein -
  JGX27_RS08320 (JGX27_08320) - 1660986..1661312 (-) 327 WP_009854680.1 multidrug efflux SMR transporter -
  JGX27_RS08325 (JGX27_08325) - 1661563..1662059 (+) 497 Protein_1588 NAD(+) diphosphatase -
  JGX27_RS08330 (JGX27_08330) - 1662111..1663880 (-) 1770 WP_009854684.1 hypothetical protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36497.48 Da        Isoelectric Point: 5.0313

>NTDB_id=581519 JGX27_RS08310 WP_009854678.1 1658535..1659536(-) (ccpA) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKEIAFVSGPLIDDINGKVRLAGYKEGLEKNGLSFKEGLVFEANYNYKDGFELAQRVINSG
ATAAFVAEDELAAGLLNGLFEAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGLTTRGTTR

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=581519 JGX27_RS08310 WP_009854678.1 1658535..1659536(-) (ccpA) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCCCGAGAAGCAGGCGTCTCTATGGCAACAGTTAGTCGTGTTGT
AAATGGCAATAAAAACGTAAAGGAAAACACACGTAAAAAAGTCCTTGAAGTTATTGATCGTTTGGATTATCGTCCAAATG
CCGTTGCCCGCGGTTTAGCAAGTAAAAAGACAACAACAGTAGGTGTTGTTATCCCTAATATTGCTAACAGCTATTTCTCA
ATTCTTGCTAAAGGGATTGATGATATTGCCGCTATGTACAAGTACAATATCGTACTTGCTTCAAGTGATGAAGATGATGA
TAAGGAAGTTAACGTTGTTAACACCTTGTTTGCTAAACAAGTGGACGGTATTATTTTCATGGGACATCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACTCCAGTTGTACTTGCGGGTACAGTTGACTTAGAACACCAACTCCCAAGT
GTTAATATTGACTACAAAGCAGCCGTTGCTGATGTTGTTGATATTTTGGCTAAAAACAATAAAGAAATCGCCTTTGTTTC
TGGTCCACTTATCGATGATATCAATGGTAAAGTGCGTTTAGCTGGTTACAAAGAAGGTCTTGAAAAAAATGGCTTATCGT
TCAAAGAAGGCCTTGTCTTTGAAGCTAACTACAACTATAAGGATGGATTTGAACTTGCACAACGTGTGATTAATTCTGGT
GCAACAGCAGCCTTTGTTGCTGAAGACGAATTGGCAGCAGGATTGTTGAATGGCTTGTTCGAAGCTGGCAAAAAAGTTCC
AGAAGACTTTGAAATTATCACAAGCAATGATTCACCAATCACATCATACACACGTCCAAACCTTAGCTCAATCAGCCAAC
CAGTTTATGACCTTGGTGCTGTCAGCATGCGTATGTTAACTAAAATCATGAATAAAGAGGAACTCGAAGAAAAAGAAATT
CTTCTTAACCACGGTCTTACAACACGTGGTACAACACGTTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A139R5I1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

80.48

100

0.805
  ccpA Streptococcus pneumoniae D39

78.378

100

0.784
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556