Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   I6L25_RS01755 Genome accession   NZ_CP077398
Coordinates   388502..390934 (+) Length   810 a.a.
NCBI ID   WP_004707462.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain FDAARGOS 1395     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 383502..395934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L25_RS01730 (I6L25_01730) - 383654..384595 (-) 942 WP_004707450.1 hypothetical protein -
  I6L25_RS01735 (I6L25_01735) - 384852..385337 (+) 486 WP_079377047.1 YaiI/YqxD family protein -
  I6L25_RS01740 (I6L25_01740) - 385348..386256 (+) 909 WP_004707455.1 DMT family transporter -
  I6L25_RS18510 - 386286..386366 (-) 81 Protein_335 PilZ domain-containing protein -
  I6L25_RS01745 (I6L25_01745) - 386504..387739 (+) 1236 WP_004707458.1 lipoprotein-releasing ABC transporter permease subunit -
  I6L25_RS01750 (I6L25_01750) lolD 387732..388418 (+) 687 WP_004707461.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  I6L25_RS01755 (I6L25_01755) comA/comEC 388502..390934 (+) 2433 WP_004707462.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  I6L25_RS01760 (I6L25_01760) - 390887..391870 (-) 984 WP_004707465.1 lysophospholipid acyltransferase family protein -
  I6L25_RS01765 (I6L25_01765) sppA 392003..393019 (+) 1017 WP_002052797.1 signal peptide peptidase SppA -
  I6L25_RS01770 (I6L25_01770) - 393039..393848 (+) 810 WP_002052584.1 alpha/beta fold hydrolase -
  I6L25_RS01775 (I6L25_01775) purN 393913..394542 (-) 630 WP_002052470.1 phosphoribosylglycinamide formyltransferase -
  I6L25_RS01780 (I6L25_01780) purM 394539..395609 (-) 1071 WP_000071984.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 810 a.a.        Molecular weight: 92536.93 Da        Isoelectric Point: 8.7286

>NTDB_id=581163 I6L25_RS01755 WP_004707462.1 388502..390934(+) (comA/comEC) [Acinetobacter nosocomialis strain FDAARGOS 1395]
MFKIILLGWVGGIALMGINLPLIMQYGKVGKALLLLAFIFYLFKRSVFVSRPFLKAMYSLLCAASLFVVGYQYAENALVE
RLQQREMDSKNLDIIVYINQLSEEKDNKVQQSAQVLNLSKDPVNWLLYLKNDNQSMLKSNQELQLGHYYRLSGKTKPAHS
YATAGAFDQEKWFIQRNIMSGFIVQYIEPLSLDEIYRLGYQQHSREQQSFFNRFQINIEKLRLTFRHLLENSSLQQKGLI
LALLTGDESLLSDETQIQFKQLGIAHLLAISGPHVLIFAIMLSWSCHQVICRYYPQIYLWKPKQVLMAIPCCFGVLIYTA
FVGFEIPALRTLLSVFIFISFILLKQPLKPFVLLIYSASLLLLMDPFSVLSAGFWLSYGACFILLRIYQTIVQIPDQHFL
SLRSKMIFMTKVLIESQGKIFIALSPLTLLFFQQISWIAPLTNIVAVPIVGGIIVPLNILAACTWFIVKPFGNMLFYFND
ILLSILLSCLGLLEKLSLPLQGISLTPLALFAVSLGILILFLPKGILPKTWGMLCCLPLIVVNKTNQPIQLHILDVGQGQ
AIFLQQPEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQGVKRLDRVVLSHLDQDHSGAFPFIQQEIPIKQVLSNEQSSTT
LKQPFQYCHQGQQWQYPELDIQILWPKEKDLAFVHSEQNQYSCVVYLHFKGISDYQNFLIMGDAGWEAEYELLEDYPSLK
VDVLVLGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQEVINRLKALHIPLKSTVEQGTLSFVLENQKIVLHNRR
FERLWLRRVP

Nucleotide


Download         Length: 2433 bp        

>NTDB_id=581163 I6L25_RS01755 WP_004707462.1 388502..390934(+) (comA/comEC) [Acinetobacter nosocomialis strain FDAARGOS 1395]
ATGTTTAAAATTATTTTATTGGGGTGGGTTGGTGGTATTGCATTGATGGGCATTAATTTACCTTTAATTATGCAATATGG
AAAAGTAGGCAAAGCTCTGCTGTTACTTGCTTTTATTTTCTATCTTTTTAAACGCTCAGTATTCGTTAGCCGACCATTTT
TAAAGGCAATGTATTCTTTGTTATGTGCAGCCAGCCTTTTTGTTGTGGGGTATCAATATGCCGAGAATGCGTTGGTCGAA
CGCTTACAACAAAGAGAAATGGATTCAAAAAATCTCGATATTATTGTTTATATAAATCAACTAAGTGAAGAAAAAGACAA
TAAAGTTCAACAAAGTGCTCAAGTATTAAACCTATCTAAAGATCCGGTAAATTGGCTACTGTATTTAAAAAATGATAATC
AAAGTATGTTGAAGAGCAATCAAGAACTTCAATTAGGCCATTACTATCGACTATCTGGAAAAACAAAACCTGCTCATAGT
TACGCCACAGCAGGAGCTTTTGATCAGGAAAAGTGGTTTATTCAGCGAAATATAATGTCTGGTTTTATTGTTCAGTATAT
TGAGCCTTTAAGCCTTGATGAAATTTATCGATTGGGATATCAACAGCATTCAAGAGAACAGCAGTCCTTTTTTAATAGAT
TTCAAATAAATATAGAAAAGCTGCGCTTAACTTTTAGACATCTATTGGAAAATTCTTCACTACAACAAAAAGGACTAATT
TTAGCTTTGCTGACTGGTGATGAAAGCCTTTTATCAGATGAGACCCAAATACAATTTAAACAATTGGGAATTGCTCACTT
GTTAGCGATTTCAGGGCCACATGTACTTATTTTTGCCATTATGTTGTCTTGGTCCTGTCATCAAGTCATCTGCCGTTATT
ATCCTCAAATTTACTTATGGAAACCCAAACAAGTTTTGATGGCTATACCATGCTGTTTCGGTGTTTTAATTTATACAGCT
TTTGTGGGTTTCGAAATTCCTGCACTAAGAACATTGTTGTCAGTCTTTATATTTATTTCTTTTATATTATTAAAACAACC
TCTTAAACCATTTGTATTGCTCATATACAGCGCAAGTTTATTATTACTCATGGACCCGTTTAGTGTCTTGTCTGCAGGGT
TTTGGTTGTCTTATGGGGCATGTTTTATTTTATTAAGAATTTATCAAACTATAGTTCAAATACCTGATCAACATTTTTTA
AGCTTACGCTCGAAAATGATTTTTATGACTAAGGTGTTAATTGAGTCTCAAGGCAAAATCTTTATTGCATTGAGTCCTTT
AACCTTACTTTTCTTTCAACAAATTTCTTGGATTGCTCCATTAACCAATATTGTTGCGGTGCCTATCGTTGGTGGGATTA
TTGTTCCTTTAAATATTCTGGCTGCTTGTACATGGTTTATTGTCAAACCATTTGGAAACATGCTTTTTTATTTCAATGAT
ATCTTGCTCAGTATATTGCTGAGTTGTTTAGGCTTATTAGAAAAACTGTCTTTACCACTACAAGGTATAAGCTTGACGCC
ACTGGCTTTATTCGCAGTGAGTTTAGGCATCCTTATTTTATTTTTGCCTAAAGGCATTTTGCCAAAAACATGGGGAATGC
TCTGTTGTTTACCTCTCATTGTTGTGAATAAAACGAACCAACCAATTCAACTTCATATTTTAGATGTTGGGCAGGGGCAG
GCTATTTTCTTGCAGCAGCCTGAACAAAACTGGCTAATTGATACAGGTGGTTCTTATGATGAAAAGATCTTTAGTATTGG
TCAAAATGTTGTAGTTCCATTCTTACGCCAACAAGGAGTGAAGCGATTAGATCGTGTTGTGCTCTCTCATCTTGATCAAG
ATCATAGTGGGGCTTTTCCTTTCATTCAGCAGGAGATTCCTATAAAGCAGGTTCTCTCAAATGAGCAATCTTCCACTACT
CTAAAGCAGCCATTTCAGTATTGTCATCAAGGTCAACAATGGCAATATCCTGAGTTAGATATTCAAATTTTATGGCCTAA
AGAAAAAGATTTGGCTTTTGTCCATTCTGAACAGAATCAATATTCCTGTGTGGTATATCTGCATTTTAAAGGAATTAGTG
ATTACCAAAATTTTCTGATTATGGGAGACGCTGGATGGGAGGCAGAATACGAATTGTTAGAAGACTATCCAAGTTTAAAA
GTAGATGTTTTGGTATTAGGCCATCATGGAAGCAAGCACAGTTCGGCTTATGATTTTTTAGCAACCCTAAAACCAAAACT
GGCAATTGCATCGGCAGGGTTTGATAACCGTTATGGCCATCCAAGCCAAGAGGTTATCAATCGTTTAAAAGCCCTTCATA
TCCCGCTTAAAAGTACAGTAGAGCAAGGAACGTTAAGTTTTGTTTTGGAAAACCAAAAAATAGTTTTACACAACCGACGT
TTTGAGCGCCTCTGGTTGCGTAGAGTTCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

84.901

99.753

0.847

  comA/comEC Acinetobacter baumannii strain A118

84.035

99.753

0.838

  comA/comEC Acinetobacter baylyi ADP1

50.86

100

0.511