Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   I6L86_RS04695 Genome accession   NZ_CP077259
Coordinates   1004918..1005928 (+) Length   336 a.a.
NCBI ID   WP_001090627.1    Uniprot ID   I0SX71
Organism   Streptococcus mitis strain FDAARGOS 1456     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 999918..1010928
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L86_RS04670 (I6L86_04670) folP 1000514..1001488 (+) 975 WP_000240964.1 dihydropteroate synthase -
  I6L86_RS04675 (I6L86_04675) - 1001490..1002812 (+) 1323 WP_000658435.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  I6L86_RS04680 (I6L86_04680) folE 1002793..1003347 (+) 555 WP_000380931.1 GTP cyclohydrolase I FolE -
  I6L86_RS04685 (I6L86_04685) folK 1003390..1004202 (+) 813 WP_000372493.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  I6L86_RS04690 (I6L86_04690) - 1004363..1004680 (-) 318 WP_000886035.1 DUF960 domain-containing protein -
  I6L86_RS04695 (I6L86_04695) ccpA 1004918..1005928 (+) 1011 WP_001090627.1 catabolite control protein A Regulator
  I6L86_RS04700 (I6L86_04700) - 1005982..1006944 (-) 963 WP_001124765.1 asparaginase -
  I6L86_RS04705 (I6L86_04705) - 1007010..1008401 (+) 1392 WP_078228369.1 Cof-type HAD-IIB family hydrolase -
  I6L86_RS04710 (I6L86_04710) - 1008617..1009069 (-) 453 WP_000079148.1 universal stress protein -
  I6L86_RS04715 (I6L86_04715) - 1009231..1009533 (+) 303 WP_000977176.1 hypothetical protein -
  I6L86_RS04720 (I6L86_04720) - 1009690..1010904 (+) 1215 WP_000666474.1 pyridoxal phosphate-dependent aminotransferase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37169.19 Da        Isoelectric Point: 5.3350

>NTDB_id=580378 I6L86_RS04695 WP_001090627.1 1004918..1005928(+) (ccpA) [Streptococcus mitis strain FDAARGOS 1456]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVTYLAKENERIAFVSGPLVDDINGKVRLVGYKEALKKAGISYSEGLVFESKYTYEDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADKGVSVPEEFEIITSDDSQISRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=580378 I6L86_RS04695 WP_001090627.1 1004918..1005928(+) (ccpA) [Streptococcus mitis strain FDAARGOS 1456]
ATGAATACAGACGATACAGTAACGATTTATGATGTCGCCCGTGAAGCAGGAGTTTCAATGGCGACAGTTAGCCGTGTAGT
CAATGGCAATAAGAATGTAAAAGAGAATACTCGTAAAAAAGTGCTTGAGGTGATTGACCGTTTGGATTACCGTCCAAATG
CAGTGGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGTGTGGTGATACCAAATATTACCAATGGTTATTTCTCA
ACGCTTGCCAAAGGGATTGATGATATTGCTGAAATGTACAAGTATAATATCGTTCTTGCTAATAGTGATGAGGATGATGA
TAAGGAAGTTTCAGTTGTCAATACCCTGTTTTCTAAGCAAGTGGATGGTATCATCTTTATGGGGTACCACTTGACTGAAA
AAATTCGTTCAGAGTTTTCTCGTTCTCGAACACCAGTTGTTCTTGCAGGAACTGTGGATGTAGAACACCAACTTCCAAGT
GTTAATATTGACTACAAACAAGCTACGATTGATGCAGTGACCTACCTTGCTAAAGAAAATGAGCGCATTGCTTTCGTAAG
CGGTCCACTAGTGGATGATATCAATGGTAAGGTTCGTTTGGTTGGCTACAAGGAAGCCTTGAAAAAAGCAGGTATTTCTT
ATAGCGAAGGATTGGTATTTGAGTCTAAATACACTTATGAAGATGGTTATGCCTTGGCAGAACGCTTGATTTCATCAAAC
GCAACTGCAGCAGTTGTAACAGGTGATGAGCTGGCAGCAGGTGTCTTGAACGGCCTTGCTGATAAGGGTGTATCAGTACC
AGAAGAATTTGAAATCATTACTAGTGATGATTCACAAATCTCACGCTTTACCCGTCCAAACTTGACAACTATTGCCCAAC
CTCTTTATGACCTTGGGGCCATCAGTATGCGTATGTTGACCAAGATTATGCACAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTCGCTCAACACGAAAACGGAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0SX71

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

95.536

100

0.955

  ccpA Streptococcus gordonii str. Challis substr. CH1

89.521

99.405

0.89

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.006

98.512

0.571