Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I6L27_RS18240 Genome accession   NZ_CP077232
Coordinates   3845587..3845970 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain FDAARGOS 1397     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3840587..3850970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L27_RS18230 (I6L27_18235) nolF 3843486..3844595 (-) 1110 WP_081409663.1 efflux RND transporter periplasmic adaptor subunit -
  I6L27_RS18235 (I6L27_18240) - 3844664..3845302 (-) 639 WP_062850073.1 hypothetical protein -
  I6L27_RS18240 (I6L27_18245) pilG 3845587..3845970 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  I6L27_RS18245 (I6L27_18250) pilH 3845994..3846356 (+) 363 WP_002116220.1 response regulator -
  I6L27_RS18250 (I6L27_18255) pilI 3846417..3846953 (+) 537 WP_087087309.1 chemotaxis protein CheW -
  I6L27_RS18255 (I6L27_18260) pilJ 3846996..3849074 (+) 2079 WP_061874138.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=580102 I6L27_RS18240 WP_000389061.1 3845587..3845970(+) (pilG) [Acinetobacter pittii strain FDAARGOS 1397]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=580102 I6L27_RS18240 WP_000389061.1 3845587..3845970(+) (pilG) [Acinetobacter pittii strain FDAARGOS 1397]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37