Detailed information NTG0578996

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: HV782_RS21305
• Genome accession: NZ_CP077087
• Coordinates: 4835290..4837524 (-)
• Length: 744 a.a.
• NCBI ID: WP_186744951.1
• Uniprot ID: -
• Organism: Pseudomonas monsensis strain PGSB 8459
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4830290..4842524

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HV782_RS21270 (HV782_021270)	murB	4830670..4831689 (-)	1020	WP_123466816.1	UDP-N-acetylmuramate dehydrogenase	-
HV782_RS21275 (HV782_021275)	-	4831686..4832150 (-)	465	WP_123466818.1	low molecular weight protein-tyrosine-phosphatase	-
HV782_RS21280 (HV782_021280)	kdsB	4832150..4832914 (-)	765	WP_186744947.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
HV782_RS21285 (HV782_021285)	-	4832911..4833096 (-)	186	WP_003174668.1	Trm112 family protein	-
HV782_RS21290 (HV782_021290)	lpxK	4833118..4834128 (-)	1011	WP_186744949.1	tetraacyldisaccharide 4'-kinase	-
HV782_RS21295 (HV782_021295)	-	4834128..4834556 (-)	429	WP_123466824.1	biopolymer transporter ExbD	-
HV782_RS21300 (HV782_021300)	exbB	4834553..4835188 (-)	636	WP_123466826.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
HV782_RS21305 (HV782_021305)	comA	4835290..4837524 (-)	2235	WP_186744951.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
HV782_RS21310 (HV782_021310)	-	4837661..4838179 (+)	519	WP_186744954.1	DUF2062 domain-containing protein	-
HV782_RS21315 (HV782_021315)	-	4838344..4839123 (-)	780	WP_003227090.1	ABC transporter permease	-
HV782_RS21320 (HV782_021320)	-	4839120..4840052 (-)	933	WP_123466834.1	ABC transporter ATP-binding protein	-
HV782_RS21325 (HV782_021325)	-	4840186..4840809 (-)	624	WP_186744956.1	glutathione S-transferase family protein	-
HV782_RS21330 (HV782_021330)	-	4840853..4841512 (-)	660	WP_128616055.1	transglutaminase family protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 81817.27 Da
• Isoelectric Point: 10.6136

>NTDB_id=578996 HV782_RS21305 WP_186744951.1 4835290..4837524(-) (comA) [Pseudomonas monsensis strain PGSB 8459]
MRTGMMALAVGLLVPLFMPALPPVGVVVLLPVVALMVLPFRSYPVAFLLFGFTWSCVGAQWALNDRLSPVLDGETRWIEG
RVTGLPQTSDGVVRFELADARSRHEKLPTLLRLAWYAGPPVNSGERWRLAVKFKRPGGLLNPDAFDHEAWLLAQRVGATG
TVKDGQRLREAHWAWRDSIRQRVLAVDAQGRAAALAALVLGDGSGLSREDWRILQHTGTVHLLVISGQHIGLLAAVMYLL
VAGLARLGVWPLRWPWLPWACGLAFAAALGYALLAGFDVPVQRACVMVGLVLLWRLRFRHLGAWWPLLLAFNGVLLVDPL
AGLRPGLWLSFAAVAVLIFTFGGRLGAWRWWQTWTRAQWLIAIGLCPVLLALNLPISLSGPLANLLAVPWVSLVVLPPAL
LGTVLLPLPYVGEGLLWLAGVLIDGLFRGLALIAVHWPAWVAASMPVWVWAIGALGALLLLLPRGVPMRILGWPLLLILA
LPPREPLAHGLADVWQLDVGQGLAILIRTRHHTLLYDAGPRFGDFDLGERVVVPALRKLRVEHIDLMMLSHADADHAGGA
LAITRGLPVTRVISGDPPGLPAELSAQACESGQQWQWDGVRFRLWQWADADDSNQRSCVLQVEANGERLLLTGDIDLHAE
RVLLDSALAVPTQWLQAPHHGSRTSSSMALLKVLNPETVLISRGHGNSFGHPHPTVLARYRKQGLRIYDSAEHGAIHLQL
GRFKPARTMRQHRRFWRDSPVLAR

Nucleotide

• Length: 2235 bp

>NTDB_id=578996 HV782_RS21305 WP_186744951.1 4835290..4837524(-) (comA) [Pseudomonas monsensis strain PGSB 8459]
ATGCGCACAGGGATGATGGCGCTGGCAGTCGGTCTGCTGGTGCCGCTTTTTATGCCGGCGTTACCGCCGGTCGGGGTCGT
GGTGCTGCTGCCGGTGGTGGCGTTGATGGTGTTGCCGTTTCGCAGCTATCCAGTGGCGTTTCTGCTGTTCGGCTTCACCT
GGAGCTGCGTCGGTGCGCAGTGGGCGTTGAATGATCGACTCTCGCCAGTGCTGGACGGCGAAACCCGCTGGATCGAAGGG
CGGGTGACGGGATTGCCGCAAACCAGCGATGGCGTCGTGCGCTTCGAACTTGCCGATGCCCGCTCGCGTCACGAGAAACT
GCCAACGTTGCTGCGGCTGGCCTGGTATGCCGGGCCACCGGTCAACAGCGGCGAGCGCTGGCGATTGGCGGTGAAGTTCA
AGCGCCCCGGCGGGCTGCTCAATCCGGATGCCTTCGATCATGAAGCCTGGTTGTTGGCCCAACGCGTCGGTGCGACCGGC
ACGGTCAAGGACGGGCAGCGTCTGCGCGAGGCACACTGGGCCTGGCGTGACAGTATTCGCCAGCGTGTGCTGGCGGTGGA
TGCGCAGGGGCGGGCCGCAGCGCTGGCGGCTTTGGTGCTGGGTGACGGCTCGGGGCTCAGTCGCGAAGATTGGCGCATTC
TGCAACACACCGGCACCGTGCATTTGCTGGTGATTTCCGGCCAGCACATCGGCCTGTTGGCGGCGGTCATGTACCTGTTG
GTCGCCGGATTGGCCCGTCTGGGCGTGTGGCCACTGCGCTGGCCATGGCTGCCGTGGGCCTGCGGTCTGGCGTTCGCGGC
GGCGCTCGGCTACGCGTTGCTGGCCGGGTTTGACGTGCCGGTGCAACGCGCCTGCGTGATGGTGGGGCTGGTGTTGCTGT
GGCGCCTGCGCTTTCGTCATCTGGGCGCGTGGTGGCCGCTGTTGCTGGCGTTCAATGGCGTGCTGTTGGTCGATCCACTG
GCCGGGTTGCGGCCGGGGTTGTGGCTGTCCTTCGCGGCAGTGGCGGTGCTGATCTTCACCTTTGGCGGACGCCTCGGTGC
CTGGCGCTGGTGGCAGACTTGGACTCGGGCGCAATGGCTGATTGCGATCGGTTTGTGTCCGGTGTTGCTGGCGCTGAACC
TGCCGATCAGCCTCAGCGGGCCGTTGGCGAATCTGTTGGCGGTGCCTTGGGTCAGTCTGGTGGTGCTGCCACCCGCGCTG
CTTGGCACGGTGTTGTTACCGCTCCCGTATGTCGGCGAAGGTTTACTGTGGCTGGCGGGTGTCTTGATCGACGGGCTGTT
TCGCGGGCTGGCGCTCATTGCCGTACACTGGCCGGCCTGGGTGGCAGCTTCGATGCCGGTGTGGGTCTGGGCGATCGGCG
CACTTGGCGCGTTGCTGTTGCTGCTGCCGCGAGGCGTGCCCATGAGGATTTTGGGCTGGCCACTACTGCTGATCCTGGCG
CTGCCGCCACGCGAGCCACTGGCACACGGCCTGGCGGATGTCTGGCAATTGGATGTTGGCCAGGGCCTGGCGATTCTGAT
CCGCACGCGTCATCACACGTTGCTGTATGACGCCGGGCCGCGTTTCGGCGATTTCGACCTCGGTGAACGGGTGGTAGTCC
CGGCCTTGCGCAAACTGCGCGTGGAACACATTGATCTGATGATGCTCAGCCATGCCGACGCCGATCATGCCGGCGGCGCG
CTGGCGATCACACGCGGCTTGCCGGTGACGCGAGTCATCAGCGGCGATCCGCCGGGCCTGCCTGCCGAATTGAGTGCCCA
AGCCTGCGAAAGTGGGCAGCAGTGGCAGTGGGATGGCGTCCGTTTTCGCCTCTGGCAATGGGCCGATGCCGACGACAGCA
ACCAGCGTTCCTGCGTGTTGCAGGTCGAGGCCAATGGCGAGCGCCTGTTGCTCACCGGCGACATCGACCTTCACGCCGAG
CGGGTTCTGCTCGATAGCGCGCTGGCAGTCCCGACCCAATGGCTGCAGGCCCCCCATCACGGCAGCCGCACCTCTTCCTC
GATGGCCCTGCTCAAGGTGTTGAATCCTGAAACGGTGCTGATTTCCCGAGGCCACGGCAATTCGTTCGGCCATCCTCATC
CCACGGTACTGGCGCGCTATCGCAAACAGGGCCTGCGCATTTACGACAGCGCCGAGCACGGCGCGATTCATCTGCAACTG
GGCAGGTTCAAACCGGCGCGGACGATGCGTCAACACCGGCGTTTCTGGCGTGATTCGCCAGTATTGGCCCGTTGA

Domains

Predicted by InterProScan.

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

• Domain of unknown function (DUF4131) (DUF4131) (40-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.25	96.774	0.593
comA	Ralstonia pseudosolanacearum GMI1000	33.948	100	0.371