Detailed information NTG0578760

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: KSS91_RS21830
• Genome accession: NZ_CP077078
• Coordinates: 4895104..4897338 (-)
• Length: 744 a.a.
• NCBI ID: WP_217836088.1
• Uniprot ID: -
• Organism: Pseudomonas azerbaijanorientalis strain SWRI123
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4890104..4902338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KSS91_RS21795 (KSS91_21795)	murB	4890484..4891503 (-)	1020	WP_217836084.1	UDP-N-acetylmuramate dehydrogenase	-
KSS91_RS21800 (KSS91_21800)	-	4891500..4891964 (-)	465	WP_217836085.1	low molecular weight protein-tyrosine-phosphatase	-
KSS91_RS21805 (KSS91_21805)	kdsB	4891964..4892728 (-)	765	WP_217836086.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KSS91_RS21810 (KSS91_21810)	-	4892725..4892910 (-)	186	WP_003179363.1	Trm112 family protein	-
KSS91_RS21815 (KSS91_21815)	lpxK	4892935..4893945 (-)	1011	WP_217836087.1	tetraacyldisaccharide 4'-kinase	-
KSS91_RS21820 (KSS91_21820)	-	4893945..4894373 (-)	429	WP_007972252.1	biopolymer transporter ExbD	-
KSS91_RS21825 (KSS91_21825)	exbB	4894370..4895005 (-)	636	WP_033047600.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
KSS91_RS21830 (KSS91_21830)	comA	4895104..4897338 (-)	2235	WP_217836088.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KSS91_RS21835 (KSS91_21835)	-	4897474..4897989 (+)	516	WP_015096398.1	DUF2062 domain-containing protein	-
KSS91_RS21840 (KSS91_21840)	-	4898136..4898915 (-)	780	WP_217836089.1	ABC transporter permease	-
KSS91_RS21845 (KSS91_21845)	-	4898912..4899844 (-)	933	WP_217836090.1	ABC transporter ATP-binding protein	-
KSS91_RS21850 (KSS91_21850)	-	4899977..4900600 (-)	624	WP_217836091.1	glutathione S-transferase family protein	-
KSS91_RS21855 (KSS91_21855)	-	4900644..4901303 (-)	660	WP_217836092.1	transglutaminase family protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 81526.92 Da
• Isoelectric Point: 9.6315

>NTDB_id=578760 KSS91_RS21830 WP_217836088.1 4895104..4897338(-) (comA) [Pseudomonas azerbaijanorientalis strain SWRI123]
MRTGMMALALGLLTLRFLPALPPVWLWLAMPVAGLMLLPFRTYPVGFYLFGLSWACANAQWALDDRLPPALDGETRWVEG
RVTGLPRHDDGVVRFELTDIQSRRTRLPRQMRLAWYGGPPVNSGERWRLAVKLKRPVGLLNPQAVDYQAWLLAQHIGATG
TVKQGDRLAPAQWAWRDGIRQRLQAVDAQGRGGALTALVLGDGAGLSREDWQILQDTGTVHLLVISGQHIGLLAGVVYLL
IAGLARLGLWPNRLPWLPWACGLAFAAALGYGMLAGFGVPVRRACLMLGLVLLWRLRFRHLGAWWPLLLALCGILLLEPL
ASLQPGFWLSFAAVAVLILTFGGRLGPWRWWQTWTRAQWLIAIGLCPLLLILGLPISLSGPAANLLAVPWISLLVLPPAL
LGTLLLPVPYVGEGLLWLAGGLIGELFRVLALLAEVLPAWVPKAIPLGVWSLGALGAFLLLLPRGVPLRPLGWPLLLLLV
FPPRSMLPEGIAEVWQLDVGQGLAILVRTRHYTLLYDAGPRFGELDQGERVVLPALHKLGVKGLDLMLISHAHADHAGGA
PAIAKGLPVIEVVSGEPSDLPVELQAGRCESGRQWTWDEVDFQLWHWPLAGDSNQNSCVLLIEANGERLLLSGDIDAAAE
RALLDSPLALPTDWLQAPHHGSRSSSSNALLDILQPKGALISRGQGNSFGHPHPTVIARYQKRGMAIYDSVDQGAIRLQL
GRFEPPWSMRQERRFWRDPPPSKP

Nucleotide

• Length: 2235 bp

>NTDB_id=578760 KSS91_RS21830 WP_217836088.1 4895104..4897338(-) (comA) [Pseudomonas azerbaijanorientalis strain SWRI123]
ATGCGCACAGGGATGATGGCGTTGGCGCTGGGGCTGCTGACTTTGCGTTTTTTGCCGGCTTTGCCGCCGGTCTGGTTGTG
GCTGGCGATGCCGGTGGCTGGTTTGATGTTGTTGCCATTCAGGACGTATCCGGTGGGGTTTTACCTGTTCGGTTTGAGTT
GGGCCTGCGCGAATGCGCAGTGGGCGCTGGATGACCGGTTGCCGCCGGCGCTGGACGGAGAAACCCGCTGGGTCGAAGGA
CGGGTCACTGGCTTGCCCCGGCATGACGACGGTGTCGTGCGTTTCGAATTGACCGACATCCAGTCCCGGCGCACCCGCCT
GCCGCGGCAAATGCGCCTGGCCTGGTACGGCGGGCCGCCGGTGAACAGTGGTGAGCGCTGGCGTCTGGCAGTCAAATTGA
AGCGCCCGGTCGGGCTCCTCAATCCGCAGGCGGTCGACTACCAGGCCTGGTTGCTGGCACAACACATCGGGGCGACCGGG
ACGGTCAAGCAGGGCGACCGCCTTGCGCCAGCCCAATGGGCCTGGCGCGATGGCATCCGCCAGCGTTTGCAAGCGGTGGA
TGCCCAGGGCCGAGGCGGCGCGTTGACCGCGTTGGTGCTCGGGGACGGTGCCGGGCTGAGTCGCGAAGACTGGCAGATAT
TGCAGGACACCGGCACGGTGCATCTGTTGGTGATTTCCGGGCAGCACATCGGCTTGCTGGCGGGCGTCGTGTATCTGTTG
ATTGCCGGCCTGGCCCGCCTTGGGTTATGGCCGAATCGTCTGCCATGGCTGCCTTGGGCGTGTGGACTGGCATTCGCCGC
GGCACTCGGTTACGGGATGCTGGCGGGATTCGGGGTGCCGGTGCGACGAGCCTGCCTGATGCTTGGCCTGGTGTTGCTGT
GGCGTCTGCGGTTTCGTCATCTCGGTGCGTGGTGGCCGCTTTTACTGGCACTCTGCGGTATTTTGCTGCTGGAGCCGCTG
GCGAGTCTCCAGCCTGGTTTCTGGCTGTCTTTCGCGGCAGTGGCCGTCTTGATATTGACCTTCGGCGGCCGGTTGGGCCC
CTGGCGATGGTGGCAAACCTGGACCCGCGCCCAGTGGCTGATTGCGATCGGATTGTGCCCGTTACTGTTGATATTGGGAT
TGCCGATCAGCCTTAGCGGTCCGGCAGCCAATTTGCTGGCGGTACCGTGGATCAGTCTGCTGGTGTTGCCACCGGCCTTG
CTCGGGACATTGCTGTTGCCGGTGCCCTACGTGGGCGAGGGCCTGTTGTGGCTGGCGGGCGGTTTGATCGGTGAGTTGTT
CAGGGTCCTGGCGTTGTTGGCCGAGGTGCTACCCGCGTGGGTACCGAAGGCGATTCCTTTGGGGGTATGGAGCCTCGGCG
CGCTGGGCGCTTTTCTACTGCTGTTGCCGCGTGGCGTTCCGCTGCGTCCGTTGGGTTGGCCGCTGCTGCTGTTGCTGGTA
TTCCCACCCCGGTCAATGCTGCCGGAAGGCATCGCTGAAGTCTGGCAGTTGGATGTGGGGCAGGGGCTGGCTATTCTGGT
GCGCACCCGGCATTACACTTTGTTGTATGACGCCGGACCGCGATTCGGTGAGCTTGACCAGGGGGAGCGGGTGGTGCTGC
CGGCGTTGCACAAACTGGGGGTGAAGGGCCTCGACCTGATGCTGATCAGCCACGCCCATGCCGATCATGCCGGTGGTGCC
CCGGCGATTGCCAAGGGCTTGCCGGTAATAGAGGTGGTCAGTGGTGAACCCTCTGACTTGCCTGTGGAACTGCAGGCCGG
GCGTTGTGAGAGCGGCCGGCAATGGACCTGGGATGAAGTCGACTTCCAGCTTTGGCACTGGCCATTGGCCGGCGACAGCA
ACCAGAACTCCTGTGTCTTGTTGATCGAGGCCAATGGCGAACGGTTGCTGTTGAGTGGCGACATCGATGCCGCCGCCGAA
AGAGCCCTGCTGGACAGTCCGTTGGCCCTGCCTACCGATTGGCTGCAGGCACCACACCACGGCAGTCGCAGTTCGTCGTC
AAATGCCCTGCTGGATATCCTGCAACCTAAAGGGGCGCTGATCTCCCGCGGCCAGGGCAATTCATTTGGCCATCCGCATC
CCACGGTGATCGCGCGTTATCAAAAACGCGGGATGGCGATCTACGACAGCGTCGACCAGGGTGCCATTCGTCTGCAACTG
GGGCGCTTCGAGCCACCGTGGTCGATGCGCCAGGAACGGCGTTTCTGGCGCGATCCGCCGCCTTCGAAGCCATGA

Domains

Predicted by InterProScan.

• Competence protein (Competence) (198-462)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-682)

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.833	95.833	0.602
comA	Ralstonia pseudosolanacearum GMI1000	33.578	100	0.368