Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | SPN032672_RS05550 | Genome accession | NC_021003 |
| Coordinates | 1047676..1047978 (+) | Length | 100 a.a. |
| NCBI ID | WP_000413382.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae SPN032672 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1042676..1052978
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPN032672_RS05520 | - | 1043433..1044491 (+) | 1059 | WP_041178985.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| SPN032672_RS05525 | - | 1044642..1045007 (+) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| SPN032672_RS05530 | comGA/cglA/cilD | 1045083..1046024 (+) | 942 | WP_000249571.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SPN032672_RS05535 | comGB/cglB | 1045972..1046988 (+) | 1017 | WP_001844019.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SPN032672_RS05540 | comGC/cglC | 1046990..1047316 (+) | 327 | WP_000738625.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SPN032672_RS05545 | comGD/cglD | 1047309..1047713 (+) | 405 | WP_000588017.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SPN032672_RS05550 | comGE/cglE | 1047676..1047978 (+) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SPN032672_RS05555 | comGF/cglF | 1047941..1048402 (+) | 462 | WP_000250537.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SPN032672_RS05560 | comGG/cglG | 1048380..1048772 (+) | 393 | WP_001818966.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| SPN032672_RS05565 | - | 1049446..1049922 (-) | 477 | WP_000777686.1 | GNAT family N-acetyltransferase | - |
| SPN032672_RS05580 | comYH | 1051220..1052173 (+) | 954 | WP_000345118.1 | class I SAM-dependent methyltransferase | Machinery gene |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11108.08 Da Isoelectric Point: 9.7273
>NTDB_id=57875 SPN032672_RS05550 WP_000413382.1 1047676..1047978(+) (comGE/cglE) [Streptococcus pneumoniae SPN032672]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=57875 SPN032672_RS05550 WP_000413382.1 1047676..1047978(+) (comGE/cglE) [Streptococcus pneumoniae SPN032672]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAGGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAGGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
98 |
100 |
0.98 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
44.444 |
90 |
0.4 |
| comYE | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |