Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ECBG_RS10525 Genome accession   NC_020995
Coordinates   2309937..2311205 (-) Length   422 a.a.
NCBI ID   WP_005229437.1    Uniprot ID   A0AAW8UHP8
Organism   Enterococcus casseliflavus EC20     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2304937..2316205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ECBG_RS10520 (ECBG_01874) - 2308158..2309867 (-) 1710 WP_005229438.1 proline--tRNA ligase -
  ECBG_RS10525 (ECBG_01873) eeP 2309937..2311205 (-) 1269 WP_005229437.1 RIP metalloprotease RseP Regulator
  ECBG_RS10530 (ECBG_01872) - 2311355..2312161 (-) 807 WP_010749318.1 phosphatidate cytidylyltransferase -
  ECBG_RS10535 (ECBG_01871) - 2312158..2312958 (-) 801 WP_015510051.1 isoprenyl transferase -
  ECBG_RS10540 (ECBG_01870) frr 2313150..2313707 (-) 558 WP_005229434.1 ribosome recycling factor -
  ECBG_RS10545 (ECBG_01869) pyrH 2313709..2314431 (-) 723 WP_005229433.1 UMP kinase -
  ECBG_RS10550 (ECBG_01868) tsf 2314579..2315460 (-) 882 WP_005229432.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45427.70 Da        Isoelectric Point: 4.4845

>NTDB_id=57822 ECBG_RS10525 WP_005229437.1 2309937..2311205(-) (eeP) [Enterococcus casseliflavus EC20]
MKTILVFIIIFSVVVVIHEFGHYFFAKRAGILVREFAIGMGPKLFAHQAKDGTTYTIRMLPLGGYVQMAGWGEDETELTP
GMPVSLVQDATGKVIKINTSKKIQLPQAIPMEVTDFDLEEKLTITGFINGNEQEAITYAVDHDATIIHEDGVEVRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILSLVLFTGLVFAQGGVANQDATIVTGIEAGTPAAEAGLQNGDEILAVEGVDVSNWS
ELTTEIQKYPDTQIALAVKRGSETLDLTATPASQESGETTIGFLGITASLKTGIGDILLGGLQTTIDNSLVIFRAVGNLI
AQPDINKLGGPVAIFQLSSQAASQGVTTVIAMMAMISINLGIFNLLPIPGLDGGKLVLNILEGLRGKPISQEKEGIITLI
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=57822 ECBG_RS10525 WP_005229437.1 2309937..2311205(-) (eeP) [Enterococcus casseliflavus EC20]
ATGAAAACGATACTTGTATTTATCATTATCTTTTCCGTAGTGGTAGTGATTCACGAGTTTGGACACTACTTCTTTGCAAA
ACGGGCAGGTATTTTAGTAAGAGAGTTTGCCATCGGTATGGGGCCTAAATTGTTCGCGCATCAAGCGAAAGATGGGACGA
CCTACACGATTCGGATGCTGCCATTAGGCGGGTATGTCCAAATGGCGGGCTGGGGTGAAGATGAAACAGAATTAACACCA
GGTATGCCAGTCTCCTTGGTTCAAGATGCAACTGGCAAAGTTATCAAAATCAATACGAGCAAAAAGATCCAATTGCCGCA
AGCGATCCCTATGGAAGTGACCGACTTTGACTTGGAGGAGAAGTTGACGATCACAGGGTTCATCAATGGCAATGAACAAG
AAGCGATTACGTACGCTGTGGATCATGATGCAACGATCATCCATGAAGATGGCGTTGAAGTTCGGATCGCACCTAAAGAC
GTTCAATTCCAGTCCGCAAAGCTTTGGCAGCGAATGCTGACGAATTTTGCTGGACCGATGAACAACTTTATTTTATCCTT
GGTCTTATTCACTGGGTTGGTGTTTGCACAAGGTGGTGTTGCGAATCAAGATGCAACCATCGTGACAGGAATCGAAGCAG
GAACACCGGCAGCTGAAGCAGGGCTGCAAAATGGCGATGAAATCTTAGCTGTCGAAGGTGTCGATGTTTCTAACTGGTCA
GAATTAACGACTGAGATCCAAAAGTACCCAGATACTCAGATTGCTCTAGCAGTCAAACGAGGATCAGAAACACTTGATTT
GACGGCAACTCCTGCGAGTCAAGAATCAGGGGAGACCACGATTGGTTTCTTAGGGATCACCGCTTCCTTAAAAACTGGGA
TCGGAGATATCTTACTGGGCGGCTTGCAAACGACCATTGACAATTCACTGGTGATTTTTAGAGCAGTCGGCAACTTGATT
GCCCAACCAGATATCAATAAATTGGGTGGACCGGTAGCGATTTTCCAACTGTCTTCTCAAGCTGCATCGCAAGGGGTAAC
AACGGTGATCGCGATGATGGCGATGATTTCTATCAACTTGGGGATCTTTAATTTATTACCGATTCCTGGATTGGATGGCG
GTAAGCTGGTTTTAAATATTTTAGAAGGTTTGCGAGGCAAGCCAATCAGCCAAGAAAAAGAAGGCATCATTACTCTGATT
GGGTTTGGGTTTTTGATGCTGCTGATGGTTCTCGTTACCTGGAATGATATCCAACGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(207-260)

Peptidase family M50 (Peptidase_M50)

(7-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

52.225

100

0.528
  eeP Streptococcus thermophilus LMG 18311

51.288

100

0.519

Multiple sequence alignment