Detailed information NTG0057777

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: CCX78_RS07745
• Genome accession: NZ_AP017931
• Coordinates: 1482842..1483843 (-)
• Length: 333 a.a.
• NCBI ID: WP_016264677.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain LK-145
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1477842..1488843

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCX78_RS07730 (LASAK_01516)	-	1478385..1479089 (+)	705	WP_056947447.1	DUF4811 domain-containing protein	-
CCX78_RS07735 (LASAK_01517)	-	1479247..1479954 (-)	708	WP_011374126.1	glucosamine-6-phosphate deaminase	-
CCX78_RS07740 (LASAK_01518)	-	1480238..1482793 (+)	2556	WP_096585382.1	transglycosylase domain-containing protein	-
CCX78_RS07745 (LASAK_01519)	ccpA	1482842..1483843 (-)	1002	WP_016264677.1	catabolite control protein A	Regulator
CCX78_RS07750 (LASAK_01520)	-	1484060..1485157 (+)	1098	WP_056947940.1	M24 family metallopeptidase	-
CCX78_RS07755 (LASAK_01521)	-	1485444..1485881 (-)	438	WP_056947938.1	YtxH domain-containing protein	-
CCX78_RS07760 (LASAK_01522)	-	1485887..1486321 (-)	435	WP_016264674.1	DUF948 domain-containing protein	-
CCX78_RS07765 (LASAK_01523)	-	1486479..1487366 (+)	888	WP_011374119.1	mechanosensitive ion channel family protein	-
CCX78_RS07770 (LASAK_01524)	-	1487391..1488287 (+)	897	WP_076631964.1	DUF368 domain-containing protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36333.50 Da
• Isoelectric Point: 4.7948

>NTDB_id=57777 CCX78_RS07745 WP_016264677.1 1482842..1483843(-) (ccpA) [Latilactobacillus sakei strain LK-145]
MEKQTITIYDVAREADVSMATVSRVVNGNPNVKPATRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVIIPDVSDIYFAS
LARGIDDVATMYKYNIILANSDENNQKEVQVLNTLLAKQVDGLIYMGHSISDAIRAEFARSKTPIVLAGSIDPDEQVGSV
NIDYVAAVKDATLKLIKNGNEKVAFICGNLDFPINSKYRLRGYKDALNEAGIPYDESLIFETEYSYSAGEALFGKVQATG
ATAAVVSDDELAVGVLNAAVDAGVNIPTDFEIVTSNNTKLTEMVRPKMTSISQPLYDMGAVGMRLLTKMMNKEEIDDKTI
LLPYSIVDRQSTK

Nucleotide

• Length: 1002 bp

>NTDB_id=57777 CCX78_RS07745 WP_016264677.1 1482842..1483843(-) (ccpA) [Latilactobacillus sakei strain LK-145]
ATGGAAAAACAAACAATTACAATTTACGACGTTGCGCGTGAAGCTGACGTATCAATGGCGACCGTCTCACGGGTTGTTAA
CGGGAACCCCAACGTTAAGCCTGCCACTCGCAAGAAAGTGCTTGAAGTGATCGACCGTTTAGACTATCGTCCTAATGCTG
TTGCTCGTGGTTTGGCAAGTAAGAAAACAACAACTGTTGGGGTTATTATCCCAGACGTTAGTGATATCTACTTTGCTTCA
TTAGCACGCGGGATTGATGATGTTGCTACAATGTACAAGTACAACATCATTTTAGCGAACTCAGATGAAAACAACCAAAA
GGAAGTTCAAGTATTGAATACCTTATTGGCAAAACAAGTGGATGGTTTAATCTACATGGGTCACAGTATCTCAGATGCAA
TCCGTGCTGAATTCGCCCGTTCTAAGACACCAATCGTATTAGCTGGTTCAATCGATCCAGACGAACAAGTCGGTAGTGTT
AATATTGACTACGTTGCAGCCGTTAAGGACGCAACTTTGAAGTTAATCAAGAACGGTAACGAAAAAGTCGCCTTCATCTG
TGGCAACTTAGATTTTCCAATCAACAGCAAATATCGTTTACGTGGCTATAAAGATGCCTTGAACGAAGCTGGTATTCCTT
ATGACGAAAGCTTAATTTTCGAAACAGAATACAGTTACAGTGCTGGTGAAGCCTTATTCGGTAAGGTTCAAGCAACTGGC
GCAACTGCTGCTGTTGTCAGTGACGATGAATTAGCCGTAGGTGTTTTAAATGCTGCTGTTGATGCAGGTGTTAATATTCC
AACTGACTTTGAAATTGTGACAAGTAATAACACGAAGTTAACTGAAATGGTTCGTCCTAAGATGACATCAATCTCACAAC
CTTTATATGATATGGGTGCTGTTGGAATGCGTCTGTTAACGAAGATGATGAACAAAGAAGAAATCGATGATAAGACAATC
CTATTGCCATATAGCATTGTTGATCGTCAATCAACTAAATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-332)

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	62.31	98.799	0.616
ccpA	Streptococcus gordonii str. Challis substr. CH1	60.486	98.799	0.598
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	56.456	100	0.565