Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   KRG72_RS06825 Genome accession   NZ_CP076703
Coordinates   1380736..1381740 (-) Length   334 a.a.
NCBI ID   WP_074481405.1    Uniprot ID   Q9LCC3
Organism   Streptococcus equinus strain S1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1375736..1386740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS06810 (KRG72_06820) thrS 1376011..1377957 (-) 1947 WP_074560709.1 threonine--tRNA ligase -
  KRG72_RS06815 (KRG72_06825) - 1378308..1379642 (-) 1335 WP_258250308.1 glycosyltransferase family 4 protein -
  KRG72_RS06820 (KRG72_06830) - 1379644..1380642 (-) 999 WP_258250309.1 glycosyltransferase -
  KRG72_RS06825 (KRG72_06835) ccpA 1380736..1381740 (-) 1005 WP_074481405.1 catabolite control protein A Regulator
  KRG72_RS06830 (KRG72_06840) - 1382080..1383165 (+) 1086 WP_258250310.1 Xaa-Pro peptidase family protein -
  KRG72_RS06835 (KRG72_06845) - 1383271..1383774 (+) 504 WP_258250311.1 NAD(+) diphosphatase -
  KRG72_RS06840 (KRG72_06850) - 1383782..1384672 (-) 891 WP_258250312.1 LysR family transcriptional regulator -
  KRG72_RS06845 (KRG72_06855) - 1384843..1385571 (+) 729 WP_039696497.1 DUF554 domain-containing protein -
  KRG72_RS06850 (KRG72_06860) - 1385745..1386173 (+) 429 WP_258250313.1 MarR family winged helix-turn-helix transcriptional regulator -
  KRG72_RS06855 (KRG72_06865) - 1386298..1386726 (+) 429 WP_074564178.1 MarR family winged helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 36699.75 Da        Isoelectric Point: 5.2999

>NTDB_id=577473 KRG72_RS06825 WP_074481405.1 1380736..1381740(-) (ccpA) [Streptococcus equinus strain S1]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKDIAFVSGPLIDDINGKVRLAGYKEGLEKNNLSFKEGLVFEANYNYKDGYELAQRVMNSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEILTSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
ILNHGLKLRGTTRQ

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=577473 KRG72_RS06825 WP_074481405.1 1380736..1381740(-) (ccpA) [Streptococcus equinus strain S1]
ATGAACACTGATGATACGATTACAATTTATGATGTTGCACGAGAAGCAGGCGTCTCAATGGCAACAGTTAGTCGTGTTGT
AAATGGCAATAAAAATGTAAAGGAAAACACTCGTAAAAAAGTCCTTGAAGTTATTGACCGTTTAGACTATCGTCCAAATG
CAGTTGCTCGTGGTTTGGCAAGTAAAAAAACTACGACAGTTGGTGTTGTTATTCCAAATATCGCTAATAGCTATTTCTCA
ATTTTAGCGAAAGGTATCGACGATATTGCTGCAATGTACAAATACAATATCGTTCTTGCGTCAAGTGATGAAGATGACGA
TAAAGAAGTTAATGTTGTTAACACTTTGTTTGCAAAACAAGTGGATGGTATTATCTTCATGGGACACCATTTAACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTGGTTCTAGCAGGAACAGTTGATTTAGAACACCAACTTCCAAGT
GTTAATATTGATTACAAAGCTGCCGTGGCTGATGTTGTTGATATTTTGGCTAAAAATAACAAAGATATTGCCTTTGTTTC
AGGACCACTTATTGATGACATTAACGGTAAAGTTCGTCTTGCAGGATACAAAGAAGGACTTGAAAAGAACAACCTATCAT
TCAAAGAAGGACTTGTATTTGAAGCTAACTACAACTACAAAGATGGTTATGAACTAGCTCAACGCGTGATGAATTCAGGT
GCTACAGCTGCATATGTTGCTGAAGACGAACTAGCTGCAGGTCTTTTGAATGGATTGTTTGCCGCAGGTAAAAAAGTTCC
TGAAGACTTTGAAATTCTTACAAGTAATGATTCACCAATCACATCATACACTCGTCCAAACCTAAGCTCAATTAGCCAAC
CGGTTTATGACCTTGGTGCGGTAAGTATGCGTATGTTGACTAAAATCATGAACAAAGAAGAACTTGAAGAAAAAGAAATT
ATTCTTAATCATGGTCTTAAATTGCGTGGTACTACACGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9LCC3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.641

100

0.796

  ccpA Streptococcus pneumoniae D39

76.946

100

0.769

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.102

0.554