Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KRG72_RS06730 Genome accession   NZ_CP076703
Coordinates   1358283..1359092 (-) Length   269 a.a.
NCBI ID   WP_258250301.1    Uniprot ID   -
Organism   Streptococcus equinus strain S1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1353283..1364092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS06720 (KRG72_06730) smc 1353684..1357223 (-) 3540 WP_258250300.1 chromosome segregation protein SMC -
  KRG72_RS06725 (KRG72_06735) rnc 1357375..1358061 (-) 687 WP_020917219.1 ribonuclease III -
  KRG72_RS06730 (KRG72_06740) vicX 1358283..1359092 (-) 810 WP_258250301.1 MBL fold metallo-hydrolase Regulator
  KRG72_RS06735 (KRG72_06745) vicK 1359093..1360445 (-) 1353 WP_039696510.1 cell wall metabolism sensor histidine kinase VicK Regulator
  KRG72_RS06740 (KRG72_06750) vicR 1360438..1361148 (-) 711 WP_039696509.1 response regulator YycF Regulator
  KRG72_RS06745 (KRG72_06755) - 1361460..1362224 (+) 765 WP_039696508.1 amino acid ABC transporter ATP-binding protein -
  KRG72_RS06750 (KRG72_06760) - 1362235..1363047 (+) 813 WP_074602531.1 transporter substrate-binding domain-containing protein -
  KRG72_RS06755 (KRG72_06765) - 1363063..1363770 (+) 708 WP_039696506.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30125.01 Da        Isoelectric Point: 5.7857

>NTDB_id=577470 KRG72_RS06730 WP_258250301.1 1358283..1359092(-) (vicX) [Streptococcus equinus strain S1]
MSENAFKYSVLASGSTGNSFYVETPQKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARRYNLD
VYANAKTWQMIDERNMIGKLDVGQKHVFERGKTLTFGDIDIESFGVSHDAVDPQFYRLMKDNKSFVVLTDTGYVSDRMAG
VIENADGYLIESNHDVEILRAGSYPWSLKQRILSDRGHLSNEDGADTMIRTIGNRTKRIYLGHLSKENNIKELAHMTMEN
NLMRADFAVGHDMTVFDTSPDEATPLAGL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=577470 KRG72_RS06730 WP_258250301.1 1358283..1359092(-) (vicX) [Streptococcus equinus strain S1]
ATGTCTGAAAATGCTTTTAAATACAGTGTCTTAGCCTCCGGTTCAACTGGAAATTCATTTTATGTGGAAACGCCACAAAA
ACGTCTTTTGATAGATGCAGGTTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGAAAACCAGAAGATT
TGGATGCTATTTTGATTACGCACGAACACTCTGATCACATTAAAGGAGTAGGAGTGCTGGCTCGCAGATACAATCTTGAT
GTATATGCCAATGCCAAAACTTGGCAAATGATTGATGAGCGCAACATGATTGGAAAACTTGATGTTGGGCAAAAACATGT
CTTTGAACGTGGTAAAACATTGACTTTTGGTGATATTGATATTGAAAGTTTTGGAGTCAGTCACGATGCTGTCGATCCGC
AATTTTACCGTTTGATGAAAGATAATAAGTCATTTGTCGTTCTGACAGATACTGGTTATGTTAGTGATCGAATGGCGGGT
GTGATTGAAAATGCTGATGGTTATCTGATTGAGTCAAACCATGATGTTGAGATTTTGCGTGCGGGTTCTTATCCGTGGAG
CTTGAAACAACGTATTCTATCTGATCGTGGTCACTTGTCAAATGAAGATGGTGCTGATACCATGATTCGTACTATCGGCA
ATCGCACAAAAAGAATTTACCTTGGACACTTGAGTAAAGAAAATAATATCAAAGAATTGGCTCATATGACCATGGAAAAT
AACTTGATGCGAGCCGATTTTGCTGTTGGTCATGACATGACTGTTTTTGATACATCACCTGATGAAGCAACGCCTTTAGC
AGGTCTATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.952

100

0.77