Detailed information NTG0576773

Bioinformatically predicted

Overview

• Name: comB9
• Type: Machinery gene
• Locus tag: MPG18_RS00730
• Genome accession: NZ_CP094165
• Coordinates: 151394..152356 (+)
• Length: 320 a.a.
• NCBI ID: WP_245078121.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe0011
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 146394..157356

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG18_RS00700 (MPG18_00700)	panD	147815..148165 (+)	351	WP_245078119.1	aspartate 1-decarboxylase	-
MPG18_RS00705 (MPG18_00705)	-	148176..148469 (+)	294	WP_000347916.1	YbaB/EbfC family nucleoid-associated protein	-
MPG18_RS00710 (MPG18_00710)	-	148469..149464 (+)	996	WP_245078672.1	PDZ domain-containing protein	-
MPG18_RS00715 (MPG18_00715)	comB6	149470..150525 (+)	1056	WP_245078674.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG18_RS00720 (MPG18_00720)	comB7	150541..150654 (+)	114	WP_073422943.1	comB7 lipoprotein	Machinery gene
MPG18_RS00725 (MPG18_00725)	comB8	150651..151394 (+)	744	WP_000660524.1	virB8 family protein	Machinery gene
MPG18_RS00730 (MPG18_00730)	comB9	151394..152356 (+)	963	WP_245078121.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG18_RS00735 (MPG18_00735)	comB10	152349..153485 (+)	1137	WP_245078122.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG18_RS00740 (MPG18_00740)	-	153555..154958 (+)	1404	WP_245078124.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
MPG18_RS00745 (MPG18_00745)	gmd	154982..156127 (+)	1146	WP_017281784.1	GDP-mannose 4,6-dehydratase	-
MPG18_RS00750 (MPG18_00750)	-	156120..157052 (+)	933	WP_245078126.1	GDP-L-fucose synthase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 36721.19 Da
• Isoelectric Point: 9.2454

>NTDB_id=576773 MPG18_RS00730 WP_245078121.1 151394..152356(+) (comB9) [Helicobacter pylori strain Hpfe0011]
MRKVLCTLMGFLLVSSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNIDYFQGQTYKIRLRYAMA
TLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKVFSFYVFSTTFTSSKHPNLQVFIEDKN
YYSNAFMKPQNKENTLENAPTNNKSLKEEKEETKEEETITIGDNTNAMKIVKKDIQKGYRALKSSQRKWYCLGICSKKSK
LSLMPEEIFNDKQFTYFKFDKKLALSKFPVVYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRSGKDYLCIRFIKKGKDE

Nucleotide

• Length: 963 bp

>NTDB_id=576773 MPG18_RS00730 WP_245078121.1 151394..152356(+) (comB9) [Helicobacter pylori strain Hpfe0011]
ATGCGTAAGGTTTTATGCACTCTTATGGGCTTTTTGTTGGTTTCTAGCGCTTTAAAAGCCGATGATTTTTTAGAAGAAGC
TAACGAAACAGCCCCCGCGAATTTAAACCACCCCATGCAGGATTTAAACGCCATTCAAGGGAGCTTTTTTGACAAAAACC
GCTCAAAAATGTCCAACACTTTGAACATTGATTACTTTCAAGGGCAAACCTATAAAATCCGCTTGCGTTATGCGATGGCG
ACCTTATTGTTTTTTTCAAAACCCATTAGCGATTTTGTTTTAGGGGATAAGGTGGGCTTTGATGCGAAAATCTTAGAAAG
TAACGATCGCATTTTGCTCATCAAACCCCTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAATGAGGGTAAGG
TTTTTTCTTTCTATGTGTTTTCTACCACTTTCACCAGTTCCAAACACCCTAATTTACAGGTTTTCATAGAAGATAAAAAT
TATTATTCCAACGCTTTTATGAAGCCACAAAACAAAGAAAATACCCTTGAAAATGCCCCCACAAACAACAAATCCTTAAA
AGAAGAAAAAGAAGAAACCAAAGAAGAAGAGACTATAACCATTGGCGATAACACTAATGCAATGAAAATCGTTAAAAAAG
ACATTCAAAAAGGTTATAGGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTAGGGATTTGTTCTAAAAAATCCAAA
CTCTCTTTGATGCCTGAAGAAATTTTTAACGACAAGCAATTCACTTATTTCAAATTTGACAAAAAATTAGCGCTCTCTAA
ATTCCCGGTGGTTTATAAAGTCGTTGATGGCTATGATAACCCGGTGAATACTAGGATTGTAGGCGATTACATTATCGCTG
AAGATGTCTCGGCTAAATGGACTTTAAGATCGGGTAAGGACTATTTGTGTATCCGTTTTATCAAAAAGGGTAAAGATGAA
TAA

Domains

Predicted by InterProScan.

• Conjugal transfer protein (CagX) (62-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB9	Helicobacter pylori P1	91.718	100	0.934