Detailed information NTG0576259

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JNUCC24_RS16845
• Genome accession: NZ_CP076532
• Coordinates: 3280073..3281248 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus sp. JNUCC-24
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3275073..3286248

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNUCC24_RS16815 (JNUCC24_16815)	-	3275241..3275660 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
JNUCC24_RS16820 (JNUCC24_16820)	comFC	3275718..3276374 (-)	657	WP_253207496.1	ComF family protein	Machinery gene
JNUCC24_RS16825 (JNUCC24_16825)	-	3276401..3276694 (-)	294	WP_024423623.1	competence protein ComFB	-
JNUCC24_RS16830 (JNUCC24_16830)	comFA	3276743..3278140 (-)	1398	WP_142927723.1	DEAD/DEAH box helicase	Machinery gene
JNUCC24_RS16835 (JNUCC24_16835)	-	3278261..3279103 (-)	843	WP_024423625.1	DegV family protein	-
JNUCC24_RS16840 (JNUCC24_16840)	degU	3279319..3280008 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
JNUCC24_RS16845 (JNUCC24_16845)	degS	3280073..3281248 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
JNUCC24_RS16850 (JNUCC24_16850)	-	3281469..3282137 (+)	669	WP_012011434.1	YigZ family protein	-
JNUCC24_RS16855 (JNUCC24_16855)	-	3282122..3283213 (+)	1092	WP_034623744.1	LCP family protein	-
JNUCC24_RS16860 (JNUCC24_16860)	-	3283249..3284316 (-)	1068	WP_024423627.1	glycosyltransferase family 4 protein	-
JNUCC24_RS16865 (JNUCC24_16865)	-	3284451..3285647 (-)	1197	WP_253207520.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=576259 JNUCC24_RS16845 WP_003213166.1 3280073..3281248(-) (degS) [Bacillus sp. JNUCC-24]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=576259 JNUCC24_RS16845 WP_003213166.1 3280073..3281248(-) (degS) [Bacillus sp. JNUCC-24]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACCCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAACATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCACTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841