Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   KOM03_RS00430 Genome accession   NZ_CP076450
Coordinates   77024..79375 (-) Length   783 a.a.
NCBI ID   WP_269461318.1    Uniprot ID   -
Organism   Bacillus velezensis strain GMEKP1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 72024..84375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KOM03_RS00390 (KOM03_00390) - 72484..72915 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  KOM03_RS00395 (KOM03_00395) - 72915..73256 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  KOM03_RS00400 (KOM03_00400) - 73249..74730 (+) 1482 WP_060561879.1 Na+/H+ antiporter subunit D -
  KOM03_RS00405 (KOM03_00405) - 74736..75212 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  KOM03_RS00410 (KOM03_00410) - 75212..75496 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  KOM03_RS00415 (KOM03_00415) mnhG 75480..75854 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  KOM03_RS00420 (KOM03_00420) - 75894..76277 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  KOM03_RS00425 (KOM03_00425) comA 76299..76943 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  KOM03_RS00430 (KOM03_00430) comP 77024..79375 (-) 2352 WP_269461318.1 histidine kinase Regulator
  KOM03_RS00435 (KOM03_00435) comX 79353..79523 (-) 171 WP_015418105.1 competence pheromone ComX -
  KOM03_RS00440 (KOM03_00440) - 79520..80449 (-) 930 WP_231945405.1 polyprenyl synthetase family protein -
  KOM03_RS00445 (KOM03_00445) degQ 80580..80720 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  KOM03_RS00450 (KOM03_00450) - 81185..81526 (+) 342 WP_060561880.1 hypothetical protein -
  KOM03_RS00455 (KOM03_00455) - 81533..82756 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  KOM03_RS00460 (KOM03_00460) - 82886..84352 (-) 1467 WP_020954301.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 783 a.a.        Molecular weight: 90878.10 Da        Isoelectric Point: 8.6663

>NTDB_id=575436 KOM03_RS00430 WP_269461318.1 77024..79375(-) (comP) [Bacillus velezensis strain GMEKP1]
MILLGVLKKQVNHVILKKFLKFFSVALLLFSIFYFTLVVYYTQNGIIIGTNVVKVSNQELKVVDMTRSSYGRLMGLEIGD
KIVEINGHKPNKENIYGSYLAKVRQLKVERNDKLIKLDNFEFIYLDSPYSFFSYIVPGIFYLLSLICIFYIFRVNLKKDS
ISAYILICFLLCISIAYLSAGGVTRGYSVNRYINLYTFLAVPVLYLNFLHQYFKELNVKFSRGIYILILYNLPLVNIICE
LFEKHIKYDVITSLNLLTFLFEMMVVYVCLILYQIKHRKKDFAYLLKVLLVSNTIAFLPFTLLYIVPLVIFGQYVYSAVI
TAPFLLLIPLALVYQFVVNKIYNIDFLLGRLRYYCLLAVIPSIGIVWVFVVFMNKNRDFNTFQITLFVFLIMLSVFYFKE
VLDYKFRLKRFSEKYNYQDSIFKYTQLIKSVSVLDQVFTHLKATILDVLPVSKAYIFEISSGGEIVYFDKQSTEPNWYPY
KDKFEKVNSEIGKIIEINQGFLMKIGERGTSSYVLLCLSSINTPRLTMDETSWLKTLSFYTSVSMENVLQIEELMDHLQN
LKQQGSNPVWLKKLMFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMT
RETCHELRPQLLYDLGLVKAVSKLAAQQQECAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLI
SIQNKVILHYEDDGVGCNQEKGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2352 bp        

>NTDB_id=575436 KOM03_RS00430 WP_269461318.1 77024..79375(-) (comP) [Bacillus velezensis strain GMEKP1]
ATGATCCTGCTTGGCGTACTTAAAAAACAAGTGAACCATGTTATTTTGAAGAAGTTTTTAAAGTTTTTTTCGGTTGCCTT
ATTATTGTTCAGTATTTTCTATTTTACTTTAGTAGTTTATTATACTCAAAATGGAATAATTATAGGTACCAATGTAGTTA
AAGTTTCTAATCAAGAACTGAAAGTTGTTGATATGACAAGATCCTCCTATGGAAGATTAATGGGGTTGGAAATTGGAGAC
AAAATTGTTGAAATAAATGGACATAAACCAAATAAAGAAAACATTTATGGCTCTTACTTAGCTAAAGTTAGACAATTAAA
AGTTGAACGTAATGATAAATTAATTAAGTTAGATAACTTTGAATTTATCTATTTAGATAGCCCGTACAGTTTCTTTTCAT
ATATTGTACCAGGTATTTTTTATTTACTGAGTTTAATATGTATTTTTTACATCTTTAGAGTTAATTTGAAGAAAGACAGC
ATATCAGCATATATTCTGATTTGTTTTTTGCTATGTATATCTATTGCTTATTTAAGTGCCGGAGGAGTGACAAGGGGATA
CTCTGTAAATCGTTATATTAATCTTTATACATTTTTAGCAGTGCCTGTTTTGTATCTTAATTTCCTGCATCAATATTTTA
AAGAATTAAACGTGAAATTTTCACGAGGGATTTATATTTTAATTTTGTATAATTTACCTTTAGTGAACATCATATGTGAA
CTATTTGAAAAGCATATAAAGTATGATGTGATTACAAGCCTTAATCTCTTAACTTTTTTATTTGAAATGATGGTGGTTTA
TGTATGTCTTATACTTTATCAAATCAAGCATAGAAAGAAAGATTTTGCTTATTTGTTAAAAGTATTATTAGTATCTAATA
CCATTGCATTCTTACCTTTTACTTTATTATATATTGTTCCTCTTGTGATCTTTGGACAATATGTATATAGTGCGGTAATC
ACTGCACCTTTTCTTTTGCTTATACCGTTAGCACTGGTATATCAATTTGTTGTTAATAAGATTTATAATATTGATTTTTT
GTTGGGACGCTTGAGGTATTATTGTTTGTTGGCGGTTATCCCCTCAATTGGTATCGTTTGGGTTTTTGTTGTGTTTATGA
ATAAAAATAGAGATTTTAATACTTTTCAAATCACCTTGTTTGTTTTTCTGATTATGCTTTCTGTTTTTTATTTTAAAGAA
GTGCTGGACTATAAGTTCCGCTTAAAGCGTTTCTCAGAAAAGTATAATTATCAAGACAGTATTTTTAAATACACACAATT
GATTAAAAGTGTGTCAGTCTTGGACCAAGTTTTCACACATCTTAAAGCGACAATTTTAGATGTTTTGCCAGTAAGCAAAG
CTTATATTTTTGAAATTAGTTCTGGCGGAGAAATTGTGTATTTTGACAAACAAAGTACAGAACCAAATTGGTATCCCTAT
AAAGACAAATTTGAAAAGGTCAATTCGGAAATCGGCAAAATCATTGAGATTAATCAAGGGTTCCTCATGAAAATTGGCGA
GAGAGGAACAAGTTCTTATGTTTTGCTTTGTTTATCAAGCATAAATACACCAAGACTTACAATGGATGAGACTTCATGGC
TGAAGACGTTATCATTTTATACCAGTGTATCGATGGAAAATGTTCTGCAAATTGAGGAACTTATGGATCACCTCCAAAAT
CTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGC
CCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGA
AAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGTCGGATGTCATTTTGATGACC
CGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCA
GCAGCAGGAGTGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCTGGATTTGGATACGCAGCTGA
ATTTGTACCGCATCATTCAGGAATTTCTGTCGAACGCCATGAAGCATTCTCAGGCGAATGAGGTGCTGATTATGCTGATC
AGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAGGAAAAAGGCGGCGGCCAGTCGAT
GAGTATGGGGCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGATGAAAATCGACACAAGTGAAGGAAACG
GTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(583-652)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.922

98.467

0.59