Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ZHX2020_RS08920 Genome accession   NZ_CP076409
Coordinates   1644987..1645106 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus sp. ZHX3     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 1639987..1650106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ZHX2020_RS08900 (ZHX2020_08860) albG 1640151..1640852 (+) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  ZHX2020_RS08905 (ZHX2020_08865) - 1640858..1642234 (-) 1377 WP_014481223.1 YncE family protein -
  ZHX2020_RS08910 (ZHX2020_08870) - 1642273..1643628 (-) 1356 WP_014481224.1 YncE family protein -
  ZHX2020_RS22640 - 1643625..1643855 (-) 231 Protein_1754 hypothetical protein -
  ZHX2020_RS08915 (ZHX2020_08875) rapF 1643858..1645003 (+) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  ZHX2020_RS08920 (ZHX2020_08880) phrF 1644987..1645106 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ZHX2020_RS08925 (ZHX2020_08885) - 1645204..1645631 (+) 428 Protein_1757 YbaK/EbsC family protein -
  ZHX2020_RS08930 (ZHX2020_08890) speB 1645696..1646568 (-) 873 WP_003227545.1 agmatinase -
  ZHX2020_RS08935 (ZHX2020_08895) speE 1646629..1647459 (-) 831 WP_003227543.1 spermidine synthase -
  ZHX2020_RS08940 (ZHX2020_08900) - 1647661..1649736 (+) 2076 WP_014481227.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=575135 ZHX2020_RS08920 WP_009968329.1 1644987..1645106(+) (phrF) [Bacillus sp. ZHX3]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=575135 ZHX2020_RS08920 WP_009968329.1 1644987..1645106(+) (phrF) [Bacillus sp. ZHX3]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487