Detailed information NTG0575134

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ZHX2020_RS08915
• Genome accession: NZ_CP076409
• Coordinates: 1643858..1645003 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus sp. ZHX3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1638858..1650003

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ZHX2020_RS08895 (ZHX2020_08855)	-	1638874..1640154 (+)	1281	WP_014481221.1	pitrilysin family protein	-
ZHX2020_RS08900 (ZHX2020_08860)	albG	1640151..1640852 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ZHX2020_RS08905 (ZHX2020_08865)	-	1640858..1642234 (-)	1377	WP_014481223.1	YncE family protein	-
ZHX2020_RS08910 (ZHX2020_08870)	-	1642273..1643628 (-)	1356	WP_014481224.1	YncE family protein	-
ZHX2020_RS22640	-	1643625..1643855 (-)	231	Protein_1754	hypothetical protein	-
ZHX2020_RS08915 (ZHX2020_08875)	rapF	1643858..1645003 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
ZHX2020_RS08920 (ZHX2020_08880)	phrF	1644987..1645106 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
ZHX2020_RS08925 (ZHX2020_08885)	-	1645204..1645631 (+)	428	Protein_1757	YbaK/EbsC family protein	-
ZHX2020_RS08930 (ZHX2020_08890)	speB	1645696..1646568 (-)	873	WP_003227545.1	agmatinase	-
ZHX2020_RS08935 (ZHX2020_08895)	speE	1646629..1647459 (-)	831	WP_003227543.1	spermidine synthase	-
ZHX2020_RS08940 (ZHX2020_08900)	-	1647661..1649736 (+)	2076	WP_014481227.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=575134 ZHX2020_RS08915 WP_014481226.1 1643858..1645003(+) (rapF) [Bacillus sp. ZHX3]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=575134 ZHX2020_RS08915 WP_014481226.1 1643858..1645003(+) (rapF) [Bacillus sp. ZHX3]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572