Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   JNUCC22_RS01975 Genome accession   NZ_CP076408
Coordinates   392828..393781 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus sp. JNUCC-22     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 387828..398781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC22_RS01950 (JNUCC22_01950) - 387874..389307 (+) 1434 WP_216062088.1 HAMP domain-containing sensor histidine kinase -
  JNUCC22_RS01955 (JNUCC22_01955) rapC 389460..390608 (+) 1149 WP_029326229.1 Rap family tetratricopeptide repeat protein Regulator
  JNUCC22_RS01960 (JNUCC22_01960) phrC 390592..390711 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  JNUCC22_RS01965 (JNUCC22_01965) - 390860..390955 (-) 96 WP_012116800.1 YjcZ family sporulation protein -
  JNUCC22_RS01970 (JNUCC22_01970) - 391050..392414 (-) 1365 WP_059366589.1 aspartate kinase -
  JNUCC22_RS01975 (JNUCC22_01975) ceuB 392828..393781 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  JNUCC22_RS01980 (JNUCC22_01980) - 393771..394718 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  JNUCC22_RS01985 (JNUCC22_01985) - 394712..395470 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  JNUCC22_RS01990 (JNUCC22_01990) - 395492..396436 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  JNUCC22_RS01995 (JNUCC22_01995) - 396478..397902 (-) 1425 WP_007410276.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=575029 JNUCC22_RS01975 WP_015239156.1 392828..393781(+) (ceuB) [Bacillus sp. JNUCC-22]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=575029 JNUCC22_RS01975 WP_015239156.1 392828..393781(+) (ceuB) [Bacillus sp. JNUCC-22]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGGACGATGGACTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGGAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATTGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCATGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCAGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536