Detailed information NTG0575027

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: JNUCC22_RS01955
• Genome accession: NZ_CP076408
• Coordinates: 389460..390608 (+)
• Length: 382 a.a.
• NCBI ID: WP_029326229.1
• Uniprot ID: -
• Organism: Bacillus sp. JNUCC-22
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 384460..395608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNUCC22_RS01935 (JNUCC22_01935)	-	384857..385540 (-)	684	WP_216062086.1	ABC transporter ATP-binding protein	-
JNUCC22_RS01940 (JNUCC22_01940)	-	385555..386991 (-)	1437	WP_076425710.1	ABC transporter permease	-
JNUCC22_RS01945 (JNUCC22_01945)	-	387204..387887 (+)	684	WP_216062087.1	response regulator transcription factor	-
JNUCC22_RS01950 (JNUCC22_01950)	-	387874..389307 (+)	1434	WP_216062088.1	HAMP domain-containing sensor histidine kinase	-
JNUCC22_RS01955 (JNUCC22_01955)	rapC	389460..390608 (+)	1149	WP_029326229.1	Rap family tetratricopeptide repeat protein	Regulator
JNUCC22_RS01960 (JNUCC22_01960)	phrC	390592..390711 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
JNUCC22_RS01965 (JNUCC22_01965)	-	390860..390955 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
JNUCC22_RS01970 (JNUCC22_01970)	-	391050..392414 (-)	1365	WP_059366589.1	aspartate kinase	-
JNUCC22_RS01975 (JNUCC22_01975)	ceuB	392828..393781 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
JNUCC22_RS01980 (JNUCC22_01980)	-	393771..394718 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
JNUCC22_RS01985 (JNUCC22_01985)	-	394712..395470 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45406.59 Da
• Isoelectric Point: 4.9221

>NTDB_id=575027 JNUCC22_RS01955 WP_029326229.1 389460..390608(+) (rapC) [Bacillus sp. JNUCC-22]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFSYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=575027 JNUCC22_RS01955 WP_029326229.1 389460..390608(+) (rapC) [Bacillus sp. JNUCC-22]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCAGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568