Detailed information NTG0574671

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: KNN15_RS01935
• Genome accession: NZ_CP076325
• Coordinates: 363387..365666 (+)
• Length: 759 a.a.
• NCBI ID: WP_273105953.1
• Uniprot ID: -
• Organism: MAG: Thermus antranikianii isolate RBS10-92
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 358387..370666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KNN15_RS01910 (KNN15_01885)	-	358861..359865 (+)	1005	WP_273105943.1	homoisocitrate dehydrogenase	-
KNN15_RS01915 (KNN15_01890)	pilM	360057..361190 (+)	1134	WP_273105946.1	type IV pilus assembly protein PilM	Machinery gene
KNN15_RS01920 (KNN15_01895)	pilN	361183..361806 (+)	624	WP_028493409.1	competence protein	Machinery gene
KNN15_RS01925 (KNN15_01900)	pilO	361796..362422 (+)	627	WP_273107705.1	type 4a pilus biogenesis protein PilO	Machinery gene
KNN15_RS01930 (KNN15_01905)	pilW	362419..363390 (+)	972	WP_273105950.1	competence protein	Machinery gene
KNN15_RS01935 (KNN15_01910)	pilQ	363387..365666 (+)	2280	WP_273105953.1	secretin N-terminal domain-containing protein	Machinery gene
KNN15_RS01940	-	365755..366270 (-)	516	WP_273105956.1	DDE transposase family protein	-
KNN15_RS01945	-	366291..366845 (-)	555	WP_014629763.1	transposase family protein	-
KNN15_RS01950 (KNN15_01920)	aroC	366923..368074 (+)	1152	WP_273105969.1	chorismate synthase	-
KNN15_RS01955 (KNN15_01925)	-	368092..368646 (+)	555	WP_028493414.1	shikimate kinase	-
KNN15_RS01960 (KNN15_01930)	-	368624..369679 (+)	1056	WP_273105974.1	3-dehydroquinate synthase family protein	-
KNN15_RS01965 (KNN15_01935)	-	369691..369918 (+)	228	WP_273105976.1	type II toxin-antitoxin system prevent-host-death family antitoxin	-
KNN15_RS01970 (KNN15_01940)	-	369906..370301 (+)	396	WP_038050666.1	type II toxin-antitoxin system VapC family toxin	-

Sequence

Protein

• Length: 759 a.a.
• Molecular weight: 83034.58 Da
• Isoelectric Point: 6.3810

>NTDB_id=574671 KNN15_RS01935 WP_273105953.1 363387..365666(+) (pilQ) [MAG: Thermus antranikianii isolate RBS10-92]
MRTALMKLVIPGLLALGMGALAGSLPQEPRFDAKVDLKISENQVRAGFTLPLDVVLEALARSVGLQPLIYRAYDASGDPA
KAQPPLPNIKLDFQGKPFREVWDLLFATYGTQFNLDYLLLPPDVVVVAPTQVITALVDAPSRTGAMERKPYLVAIPEIAY
RRTETDAQGQVRTVVNIDGAKGWVQNDLLPFLSREASGLSVNWIVVEEGGKLRALLSVLATPEQHIRFSDILQRAGIDFR
PLPVLTLPKPRVERTYVVAHATFPEILAFLQGRVPGAQISVVPTDPKRALITATEEDHARIAELLKVADVPKPTPVVRRV
YTLQNLTFQEAQERLKPVLERELKGARLEGVPGNPKALLLEATEADQAFFAEILKAADVPPQVAPPTQEATVRRLYPLRF
ADAEKVASFLAREVPGIVVQTVPGQPVLSVRGTEKQLSEVENLLAQIDRAPEQGPPILQRSYQLSNAKAADLAKVLQEAL
QARQAQAPQGQARSQAPTRQATVVADERTNTLIVTGTQEDLALVEGLIPKLDQAVPQVNLRVRIQEVQSNFSRNLGLKWN
TIAGGNVAASILDTGLSLIFDSTRSLAALNIIATLEALQRQGLSRALRDVNQTVLNNQTARLQSGETFLIRRVVGDRVER
VPFDIGIIVEVTPQITADGQILLNIKAEVSGNVQRNPVDGDVDRFTKQVVTTTLRVRDGQTVVLGGLTSQENNQVQQGVP
FLMDIPLIGELFKQRTQETTDRELLVVITADIVKETASR

Nucleotide

• Length: 2280 bp

>NTDB_id=574671 KNN15_RS01935 WP_273105953.1 363387..365666(+) (pilQ) [MAG: Thermus antranikianii isolate RBS10-92]
GTGAGAACGGCGCTTATGAAACTTGTGATCCCCGGCCTGTTGGCCCTCGGCATGGGGGCCCTAGCGGGAAGCCTTCCCCA
GGAACCCCGCTTTGACGCCAAGGTGGACCTGAAGATTTCCGAAAACCAGGTGCGGGCCGGGTTCACCCTGCCCCTGGATG
TGGTCCTGGAAGCCCTGGCCCGGAGCGTGGGCCTCCAACCCCTCATCTACCGGGCCTACGATGCCTCCGGCGACCCGGCC
AAGGCCCAGCCCCCCTTACCCAACATCAAGTTGGACTTTCAGGGCAAACCCTTCCGGGAGGTCTGGGACCTCCTCTTCGC
CACCTACGGCACCCAGTTCAACCTGGACTACCTCCTACTGCCTCCCGACGTAGTGGTGGTGGCCCCCACCCAGGTGATCA
CGGCCTTGGTGGACGCCCCAAGCCGCACCGGGGCCATGGAGCGGAAACCCTACCTGGTGGCCATCCCTGAGATCGCCTAC
CGGCGCACGGAAACCGACGCCCAGGGTCAAGTTCGCACCGTGGTGAACATAGATGGGGCCAAGGGCTGGGTGCAAAACGA
TCTCCTGCCCTTCCTTTCCCGGGAAGCCAGCGGGCTTAGCGTGAACTGGATTGTGGTAGAGGAAGGGGGCAAGCTCAGGG
CCCTACTCTCTGTCCTGGCCACCCCAGAACAGCACATTCGCTTCTCGGACATTCTCCAGCGGGCTGGGATTGACTTCCGC
CCTCTACCTGTCCTCACCTTACCTAAACCGAGGGTTGAACGGACGTATGTGGTTGCCCATGCCACCTTCCCCGAGATTCT
GGCTTTTTTGCAAGGCCGGGTGCCGGGCGCACAAATCAGCGTGGTCCCTACAGATCCCAAACGGGCCCTCATCACCGCCA
CCGAGGAGGACCACGCCCGCATCGCCGAACTCCTGAAGGTGGCCGACGTACCCAAGCCCACCCCCGTGGTGCGCCGGGTC
TACACCTTGCAGAACCTCACTTTCCAGGAAGCCCAGGAAAGGCTTAAGCCCGTCCTGGAACGAGAGCTGAAAGGAGCCCG
CTTGGAAGGCGTCCCGGGTAATCCCAAAGCCCTTCTTCTGGAAGCTACCGAAGCTGACCAGGCTTTCTTCGCCGAGATCC
TCAAGGCCGCTGATGTACCCCCCCAGGTGGCCCCGCCCACCCAGGAGGCCACGGTGCGGAGGCTCTACCCCTTGCGCTTC
GCCGATGCCGAAAAGGTGGCCTCCTTCCTGGCCAGGGAAGTGCCGGGAATCGTGGTGCAGACGGTGCCTGGACAACCGGT
CCTCTCCGTACGGGGGACGGAGAAACAACTTTCTGAAGTGGAGAACCTGCTGGCTCAGATCGACCGGGCTCCCGAGCAAG
GACCGCCCATCCTCCAGCGTTCCTACCAGCTCTCCAACGCCAAGGCCGCCGACCTGGCCAAGGTGCTCCAGGAGGCCTTG
CAAGCCCGGCAGGCCCAGGCTCCCCAGGGCCAGGCCCGGTCTCAAGCCCCCACACGCCAGGCCACGGTGGTGGCGGACGA
GCGCACCAACACCCTGATCGTCACGGGCACACAGGAGGATCTAGCCCTAGTGGAAGGCCTTATTCCCAAGCTGGACCAGG
CGGTGCCCCAGGTGAACCTAAGGGTGCGCATCCAGGAGGTGCAGTCCAACTTCAGCCGAAACCTGGGCCTCAAGTGGAAC
ACCATTGCCGGGGGAAATGTAGCGGCCAGCATCCTGGACACGGGGCTTTCCCTTATCTTTGACAGCACCCGGAGCCTGGC
CGCCCTGAACATCATCGCCACCCTCGAGGCCCTCCAGCGCCAGGGCCTTTCCCGAGCCCTTAGGGACGTGAACCAAACCG
TGCTCAACAACCAAACCGCCCGCCTGCAATCCGGGGAAACCTTCCTCATCCGCCGGGTGGTGGGAGACCGGGTGGAGCGG
GTACCCTTCGACATCGGCATCATCGTGGAGGTGACCCCCCAGATCACCGCCGACGGGCAGATCCTCCTCAACATCAAGGC
GGAGGTTTCCGGGAACGTCCAGCGCAACCCCGTGGACGGGGACGTGGACCGCTTCACCAAGCAGGTGGTAACCACCACCC
TGCGGGTGCGGGATGGGCAGACCGTGGTCCTCGGGGGTCTAACCTCCCAGGAAAATAACCAGGTGCAGCAGGGGGTCCCC
TTCCTCATGGACATCCCCCTGATCGGGGAACTCTTCAAACAACGCACCCAGGAAACCACCGACCGGGAGCTTCTGGTGGT
CATTACCGCCGACATCGTAAAGGAAACCGCAAGCCGCTAG

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (597-754)

• Bacterial type II/III secretion system short domain (Secretin_N) (394-453)

• Bacterial type II/III secretion system short domain (Secretin_N) (460-537)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Thermus thermophilus HB27	81.926	99.868	0.818