Detailed information NTG0574429

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KM146_RS22825
• Genome accession: NZ_CP076287
• Coordinates: 3208717..3209745 (-)
• Length: 342 a.a.
• NCBI ID: WP_257739454.1
• Uniprot ID: -
• Organism: Vibrio alginolyticus strain ZJ-0
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3203717..3214745

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KM146_RS22795 (KM146_22780)	zapB	3203735..3203977 (+)	243	WP_005379536.1	cell division protein ZapB	-
KM146_RS22800 (KM146_22785)	rraA	3204113..3204619 (-)	507	WP_005397954.1	ribonuclease E activity regulator RraA	-
KM146_RS22805 (KM146_22790)	-	3204696..3205613 (-)	918	WP_065274112.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KM146_RS22810 (KM146_22795)	hslU	3205922..3207253 (-)	1332	WP_005397950.1	HslU--HslV peptidase ATPase subunit	-
KM146_RS22815 (KM146_22800)	hslV	3207277..3207828 (-)	552	WP_005383176.1	ATP-dependent protease subunit HslV	-
KM146_RS22820 (KM146_22805)	ftsN	3207944..3208492 (-)	549	WP_031780671.1	cell division protein FtsN	-
KM146_RS22825 (KM146_22810)	cytR	3208717..3209745 (-)	1029	WP_257739454.1	DNA-binding transcriptional regulator CytR	Regulator
KM146_RS22830 (KM146_22815)	priA	3210049..3212250 (-)	2202	WP_065274114.1	primosomal protein N'	-
KM146_RS22835 (KM146_22820)	rpmE	3212535..3212756 (+)	222	WP_005379546.1	50S ribosomal protein L31	-
KM146_RS22840 (KM146_22825)	rpsJ	3213212..3213523 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
KM146_RS22845 (KM146_22830)	rplC	3213538..3214167 (+)	630	WP_005379555.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37751.39 Da
• Isoelectric Point: 6.2464

>NTDB_id=574429 KM146_RS22825 WP_257739454.1 3208717..3209745(-) (cytR) [Vibrio alginolyticus strain ZJ-0]
MNERLKTMATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPY
FSEIIRGIEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELEL
PTVHIDNLTSAFEAVNYLTQLGHKRIAQISGPDTAILCQFRQQGYQQALRRAGINKDPQYSVITEFSFDGGAKAVRKLLE
LPEPPTAIFCHCDTMAIGAIQEAKNLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLEMLKGHDVH
SGSRLLETNLVIRGSAAPPQRP

Nucleotide

• Length: 1029 bp

>NTDB_id=574429 KM146_RS22825 WP_257739454.1 3208717..3209745(-) (cytR) [Vibrio alginolyticus strain ZJ-0]
ATAAACGAGAGGTTAAAAACTATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCTACGGCTACGGTATCTCG
AGCATTAATGAACCCAGAGAAGGTCTCTTCTTCAACGAGAAAAAGAGTAGAAGATGCCGTACTTGAAGCGGGTTATTCTC
CAAACTCATTAGCGCGTAACTTACGTAGAAACGAATCAAAAACCATTGTCACTATCGTTCCCGACATCTGTGATCCTTAT
TTTTCTGAAATTATTCGCGGCATTGAAGATGCTGCCATGGAACATGGCTATCTAGTCCTGCTGGGCGATAGCGGACAACA
GAAGAAACGCGAAAGTTCTTTCGTTAACCTCGTATTTACTAAGCAGGCGGATGGAATGCTACTGCTTGGCACAGATCTAC
CGTTCGATGTCAGTAAGCCAGAACAAAAGAACTTACCTCCGATGGTAATGGCGTGTGAATTTGCGCCAGAGTTAGAACTT
CCGACAGTACATATTGACAACCTGACCTCAGCATTTGAAGCGGTGAATTACCTAACCCAACTAGGTCATAAACGCATCGC
GCAAATCTCGGGGCCAGATACGGCAATATTGTGTCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGCCGCGCAGGCA
TCAATAAAGATCCTCAATATAGTGTCATTACTGAGTTCTCTTTTGATGGCGGAGCAAAAGCCGTTCGTAAACTGCTCGAA
TTGCCTGAGCCACCAACGGCTATTTTCTGTCACTGTGACACAATGGCCATCGGCGCAATTCAAGAAGCGAAAAATCTTGG
CTTACGAGTACCGCAAGATCTCTCCGTTGTGGGCTTTGATGACATTAACTTCGCTCAGTACTGCGATCCACCGTTGACCA
CTATCTCTCAGCCTCGCTATGAGATTGGTCGACAAGCGATGCTAATGATGCTTGAGATGTTAAAAGGACACGACGTGCAT
TCAGGCTCGCGCCTACTTGAAACTAACCTCGTCATTCGCGGAAGCGCAGCGCCACCACAGCGCCCTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-335)

• Bacterial regulatory proteins, lacI family (LacI) (10-55)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	97.935	99.123	0.971
cytR	Vibrio cholerae C6706	89.521	97.661	0.874