Detailed information NTG0057181

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HCBAA847_RS11020
• Genome accession: NC_020555
• Coordinates: 2137738..2138523 (-)
• Length: 261 a.a.
• NCBI ID: WP_002955973.1
• Uniprot ID: A0AAI8MPQ4
• Organism: Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2132738..2143523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HCBAA847_RS11000 (HCBAA847_2264)	speA	2133095..2134945 (-)	1851	WP_002955968.1	biosynthetic arginine decarboxylase	-
HCBAA847_RS11005 (HCBAA847_2265)	ybeY	2135070..2135735 (+)	666	WP_230197842.1	rRNA maturation RNase YbeY	-
HCBAA847_RS12225	-	2136314..2136637 (+)	324	WP_133247155.1	hypothetical protein	-
HCBAA847_RS11010 (HCBAA847_2266)	-	2136575..2137216 (-)	642	WP_002955971.1	TetR/AcrR family transcriptional regulator	-
HCBAA847_RS11015 (HCBAA847_2267)	dprB	2137316..2137738 (-)	423	WP_015453882.1	Holliday junction resolvase RuvX	Machinery gene
HCBAA847_RS11020 (HCBAA847_2268)	dprA	2137738..2138523 (-)	786	WP_002955973.1	DNA-processing protein DprA	Machinery gene
HCBAA847_RS11025 (HCBAA847_2269)	-	2138560..2139642 (-)	1083	WP_015453883.1	divergent polysaccharide deacetylase family protein	-
HCBAA847_RS11030 (HCBAA847_2270)	minE	2139643..2139894 (-)	252	WP_002955975.1	cell division topological specificity factor MinE	-
HCBAA847_RS11035 (HCBAA847_2271)	minD	2139891..2140706 (-)	816	WP_002955976.1	septum site-determining protein MinD	-
HCBAA847_RS11040 (HCBAA847_2272)	-	2140773..2141324 (-)	552	WP_002955977.1	hypothetical protein	-
HCBAA847_RS11045 (HCBAA847_2273)	-	2141324..2142238 (-)	915	WP_002955978.1	hypothetical protein	-
HCBAA847_RS11050 (HCBAA847_2274)	-	2142244..2143449 (-)	1206	WP_002955979.1	argininosuccinate synthase	-

Sequence

Protein

• Length: 261 a.a.
• Molecular weight: 29150.05 Da
• Isoelectric Point: 8.7183

>NTDB_id=57181 HCBAA847_RS11020 WP_002955973.1 2137738..2138523(-) (dprA) [Helicobacter cinaedi CCUG 18818 = ATCC BAA-847]
MKADIQSLESIPLNLKALKNPPKKLFYKGGALDSLLQVQPKIAIVGTRKPNPYTKSFVAKLASNIAKLQGVVVSGGAIGV
DIIAHIHAFPRTIMFSPSSLDIYYPRSNKTMIEKMMQECAVISEYESPYMPHRFSFLERNRLVIALSDVVIIPQADKQSG
SMQSARIACELKKELFVLPHRLGESDGTQELLAKGKAQCIYDINAFLEGIFGVKLQENDEVLAFCMKNPSFEEAYLKFGE
KIYEYELEGKIVRESGSIRVL

Nucleotide

• Length: 786 bp

>NTDB_id=57181 HCBAA847_RS11020 WP_002955973.1 2137738..2138523(-) (dprA) [Helicobacter cinaedi CCUG 18818 = ATCC BAA-847]
ATGAAAGCAGATATACAATCTTTAGAATCTATCCCTTTAAATCTTAAAGCATTAAAAAATCCACCAAAAAAGCTTTTTTA
TAAGGGTGGGGCATTAGATTCACTGCTTCAAGTACAGCCTAAAATCGCCATTGTCGGCACAAGAAAGCCTAATCCTTACA
CAAAGTCCTTTGTTGCTAAACTCGCTTCAAATATCGCAAAGCTTCAAGGTGTAGTGGTGAGCGGAGGGGCGATTGGTGTG
GATATTATCGCACATATTCACGCTTTTCCACGCACGATAATGTTCTCCCCCTCAAGCCTAGATATTTACTATCCGCGTTC
AAATAAAACAATGATTGAAAAAATGATGCAAGAATGTGCGGTAATAAGCGAGTATGAAAGCCCATATATGCCCCATAGAT
TTAGCTTTTTAGAACGCAATCGGCTTGTGATTGCCCTAAGTGATGTGGTGATTATCCCCCAAGCAGATAAGCAAAGTGGC
TCAATGCAGAGTGCTAGAATCGCCTGTGAGCTTAAAAAAGAGCTTTTTGTCCTGCCTCATCGTTTGGGGGAGAGTGATGG
GACACAAGAGCTTTTAGCCAAGGGCAAGGCACAATGTATTTATGATATAAATGCGTTTTTGGAAGGGATTTTTGGCGTGA
AATTGCAAGAAAATGATGAGGTTTTGGCATTTTGTATGAAGAATCCTAGCTTTGAGGAGGCGTATTTAAAATTTGGTGAA
AAGATTTATGAATACGAGCTTGAAGGCAAAATCGTGCGTGAATCTGGAAGCATACGGGTGCTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (10-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	55	99.617	0.548
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.362	90.038	0.444