Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   MNY35_RS03345 Genome accession   NZ_CP093298
Coordinates   787000..788943 (-) Length   647 a.a.
NCBI ID   WP_015417452.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain MN-13     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 782000..793943
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNY35_RS03315 (MNY35_03315) - 783676..784038 (-) 363 WP_003154327.1 Asp23/Gls24 family envelope stress response protein -
  MNY35_RS03320 (MNY35_03320) rpmB 784297..784485 (+) 189 WP_003154328.1 50S ribosomal protein L28 -
  MNY35_RS03325 (MNY35_03325) spoVM 784563..784643 (-) 81 WP_003154329.1 stage V sporulation protein SpoVM -
  MNY35_RS03330 (MNY35_03330) - 784730..785374 (-) 645 WP_033574581.1 thiamine diphosphokinase -
  MNY35_RS03335 (MNY35_03335) rpe 785443..786093 (-) 651 WP_032874864.1 ribulose-phosphate 3-epimerase -
  MNY35_RS03340 (MNY35_03340) rsgA 786095..786985 (-) 891 WP_033574582.1 ribosome small subunit-dependent GTPase A -
  MNY35_RS03345 (MNY35_03345) stkP 787000..788943 (-) 1944 WP_015417452.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  MNY35_RS03350 (MNY35_03350) - 788937..789698 (-) 762 WP_033574583.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  MNY35_RS03355 (MNY35_03355) rlmN 789704..790795 (-) 1092 WP_014417746.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  MNY35_RS03360 (MNY35_03360) rsmB 790799..792139 (-) 1341 WP_015417450.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  MNY35_RS03365 (MNY35_03365) fmt 792129..793079 (-) 951 WP_033574584.1 methionyl-tRNA formyltransferase -
  MNY35_RS03370 (MNY35_03370) def 793084..793566 (-) 483 WP_033574585.1 peptide deformylase -

Sequence


Protein


Download         Length: 647 a.a.        Molecular weight: 71693.34 Da        Isoelectric Point: 5.1202

>NTDB_id=571149 MNY35_RS03345 WP_015417452.1 787000..788943(-) (stkP) [Bacillus amyloliquefaciens strain MN-13]
MLTGKRISGRYHILRPIGGGGMANVFLAEDIILEREVAIKILRFDFVNDIDFIRRFRREAQSASSLDHPNIVSIYDIGEE
GDIYYIVMEYVEGMTLKEYINAHGPLHPKEALSVMEQIVSAIAHAHQNHIVHRDIKPHNILIDHLGHIKVTDFGIATALT
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGKIPFDGESAVSIALKHLQTETPSARKWNPSIPQS
VENIILKATAKDPFHRYESAEDMEADIRTAFDAGRLNEQKFSVQDDEEMTKAIPVITDGAKAAPQAETPGETDDKEQQPA
KKKKRKWPWVLLAVCFIFIMAAVLAVTVFPSLFMPKDVSVPDVRGMKYEKAEALLEKNGLRADPDITDIEDEKIEEELMV
KTDPKAGSTVKEGSSVKLYKSLGKPKTQLIDVKGRQIGDAKKALKEKGFKHVNVKEENDDSEAGTVIDQNPSAGTDMVAS
DDEVNLTVSLGPADVTLRDLKTYSKEAASGYLEDNGLQLVEKQAHSDDVPKGQVMKQEPAAGTAVKPGSNVEVTFSLGPE
EKPAKTVKEKISIPYEPEHEGDELEVQIAIDDKDHSISDTYDSFKIKEPTEKTIELKIDQGQKGYYQVMVDHKVVSYKTI
EYPKDND

Nucleotide


Download         Length: 1944 bp        

>NTDB_id=571149 MNY35_RS03345 WP_015417452.1 787000..788943(-) (stkP) [Bacillus amyloliquefaciens strain MN-13]
GTGCTAACCGGCAAGCGGATCAGCGGGCGTTATCATATCCTCCGGCCCATTGGCGGCGGCGGAATGGCAAACGTTTTTTT
AGCTGAGGACATCATTCTCGAACGTGAAGTCGCAATTAAAATTCTGCGGTTTGACTTTGTGAATGACATTGATTTTATCA
GGCGTTTCAGAAGAGAAGCACAGTCGGCATCAAGCCTCGATCATCCGAATATCGTCAGTATTTACGATATCGGGGAGGAA
GGCGATATTTATTACATTGTCATGGAATATGTGGAAGGCATGACATTAAAGGAATACATAAACGCACACGGACCGCTTCA
TCCGAAAGAAGCGCTGTCTGTTATGGAGCAGATCGTCTCGGCCATCGCCCATGCCCATCAAAACCATATCGTGCACCGGG
ATATTAAACCGCACAATATATTGATAGATCATTTAGGGCATATCAAGGTGACGGATTTCGGCATCGCCACAGCGCTTACG
TCTACGACAATCACACATACGAATTCTGTGCTGGGCTCGGTTCATTATTTGTCTCCGGAGCAAGCGAGAGGCGGTCTGGC
AACGAAAAAATCAGATATTTACGCGCTCGGCATCGTGCTGTTTGAGCTTTTAACAGGTAAAATTCCTTTTGACGGAGAAT
CAGCCGTCAGCATAGCGCTAAAGCATCTGCAAACAGAAACGCCTTCCGCCAGAAAGTGGAACCCTTCCATTCCGCAGAGC
GTCGAAAACATTATTTTAAAGGCAACCGCTAAAGACCCGTTTCACCGCTATGAAAGCGCCGAGGACATGGAAGCGGACAT
CAGAACGGCTTTTGACGCCGGCAGGCTGAATGAACAAAAATTTTCCGTGCAGGATGATGAGGAAATGACAAAAGCCATTC
CCGTCATTACTGACGGCGCAAAAGCCGCGCCTCAGGCGGAAACGCCGGGGGAGACAGATGATAAGGAACAGCAGCCCGCC
AAAAAGAAAAAACGGAAATGGCCGTGGGTTTTGCTGGCCGTCTGTTTCATTTTCATTATGGCAGCTGTTCTTGCGGTCAC
CGTGTTCCCGTCTTTGTTTATGCCTAAAGATGTAAGCGTCCCCGACGTACGGGGCATGAAGTACGAAAAAGCGGAAGCCC
TGCTTGAAAAGAACGGGCTCCGGGCGGATCCTGATATAACGGATATTGAAGATGAAAAAATAGAAGAGGAATTAATGGTC
AAAACGGACCCAAAAGCGGGGTCTACCGTTAAAGAAGGCTCTTCTGTAAAACTGTACAAAAGCCTCGGAAAACCGAAAAC
CCAGCTGATCGACGTGAAAGGGCGGCAGATCGGCGACGCAAAAAAAGCGCTGAAGGAAAAAGGCTTCAAACATGTCAATG
TCAAAGAAGAGAACGATGACAGCGAGGCCGGCACCGTAATTGATCAGAACCCGTCAGCCGGCACCGACATGGTTGCAAGC
GACGATGAAGTCAATCTAACGGTCAGCCTCGGCCCGGCGGACGTTACGCTGAGGGACTTAAAGACTTACAGCAAAGAAGC
GGCTTCAGGGTATCTTGAAGATAACGGCCTGCAGCTTGTTGAAAAACAAGCCCATTCAGATGACGTGCCAAAAGGACAAG
TCATGAAACAAGAGCCGGCAGCCGGCACTGCGGTTAAGCCGGGAAGTAATGTTGAAGTGACGTTCTCGCTCGGACCTGAA
GAAAAACCGGCGAAAACGGTAAAAGAAAAAATCAGCATTCCTTACGAACCCGAACATGAAGGGGACGAGCTTGAAGTGCA
AATCGCCATCGATGATAAGGACCACAGCATCTCTGATACGTATGACTCATTTAAAATAAAAGAGCCGACTGAAAAAACAA
TTGAACTGAAGATTGATCAGGGACAGAAGGGGTATTATCAAGTGATGGTCGATCATAAAGTCGTCAGCTACAAAACGATT
GAATACCCGAAAGATAATGACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

39.274

93.663

0.368

  stkP Streptococcus pneumoniae D39

39.109

93.663

0.366

  stkP Streptococcus pneumoniae R6

39.109

93.663

0.366

  stkP Streptococcus pneumoniae Rx1

38.944

93.663

0.365