Detailed information NTG0569486

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KHS93_RS17010
• Genome accession: NZ_CP075547
• Coordinates: 3447929..3449092 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain SN16-1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3442929..3454092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHS93_RS16980 (KHS93_16980)	-	3443194..3443613 (-)	420	WP_069473598.1	TIGR03826 family flagellar region protein	-
KHS93_RS16985 (KHS93_16985)	comFC	3443687..3444376 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
KHS93_RS16990 (KHS93_16990)	-	3444382..3444666 (-)	285	WP_057080260.1	competence protein ComFB	-
KHS93_RS16995 (KHS93_16995)	comFA	3444724..3446109 (-)	1386	WP_069473599.1	DEAD/DEAH box helicase	Machinery gene
KHS93_RS17000 (KHS93_17000)	-	3446217..3447065 (-)	849	WP_043867471.1	DegV family protein	-
KHS93_RS17005 (KHS93_17005)	degU	3447163..3447852 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KHS93_RS17010 (KHS93_17010)	degS	3447929..3449092 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
KHS93_RS17015 (KHS93_17015)	-	3449315..3449962 (+)	648	WP_043867472.1	YigZ family protein	-
KHS93_RS17020 (KHS93_17020)	-	3449967..3451181 (+)	1215	WP_043867473.1	LCP family protein	-
KHS93_RS17025 (KHS93_17025)	-	3451271..3452347 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
KHS93_RS17030 (KHS93_17030)	-	3452480..3453676 (-)	1197	WP_003151381.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=569486 KHS93_RS17010 WP_003151385.1 3447929..3449092(-) (degS) [Bacillus amyloliquefaciens strain SN16-1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=569486 KHS93_RS17010 WP_003151385.1 3447929..3449092(-) (degS) [Bacillus amyloliquefaciens strain SN16-1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GTACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948