Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   KIL00_RS20160 Genome accession   NZ_CP075344
Coordinates   3846629..3846748 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. subtilis strain A1 - Midalam     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3841629..3851748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIL00_RS20140 (KIL00_20140) albG 3841793..3842494 (+) 702 WP_069837830.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  KIL00_RS20145 (KIL00_20145) ywhL 3842500..3843876 (-) 1377 WP_069837831.1 YncE family protein -
  KIL00_RS20150 (KIL00_20150) ywhK 3843915..3845270 (-) 1356 WP_213783483.1 YncE family protein -
  KIL00_RS22270 - 3845267..3845497 (-) 231 Protein_3928 hypothetical protein -
  KIL00_RS20155 (KIL00_20155) rapF 3845500..3846645 (+) 1146 WP_213783484.1 Rap family tetratricopeptide repeat protein Regulator
  KIL00_RS20160 (KIL00_20160) phrF 3846629..3846748 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  KIL00_RS20165 (KIL00_20165) ywhH 3846846..3847283 (+) 438 Protein_3931 YbaK/EbsC family protein -
  KIL00_RS20170 (KIL00_20170) speB 3847348..3848220 (-) 873 WP_003227545.1 agmatinase -
  KIL00_RS20175 (KIL00_20175) speE 3848281..3849111 (-) 831 WP_003227543.1 spermidine synthase -
  KIL00_RS20180 (KIL00_20180) pbpG 3849313..3851388 (+) 2076 WP_069837833.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=568956 KIL00_RS20160 WP_009968329.1 3846629..3846748(+) (phrF) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=568956 KIL00_RS20160 WP_009968329.1 3846629..3846748(+) (phrF) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487