Detailed information NTG0568955

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KIL00_RS20155
• Genome accession: NZ_CP075344
• Coordinates: 3845500..3846645 (+)
• Length: 381 a.a.
• NCBI ID: WP_213783484.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain A1 - Midalam
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3840500..3851645

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIL00_RS20135 (KIL00_20135)	albF	3840516..3841796 (+)	1281	WP_069837829.1	pitrilysin family protein	-
KIL00_RS20140 (KIL00_20140)	albG	3841793..3842494 (+)	702	WP_069837830.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
KIL00_RS20145 (KIL00_20145)	ywhL	3842500..3843876 (-)	1377	WP_069837831.1	YncE family protein	-
KIL00_RS20150 (KIL00_20150)	ywhK	3843915..3845270 (-)	1356	WP_213783483.1	YncE family protein	-
KIL00_RS22270	-	3845267..3845497 (-)	231	Protein_3928	hypothetical protein	-
KIL00_RS20155 (KIL00_20155)	rapF	3845500..3846645 (+)	1146	WP_213783484.1	Rap family tetratricopeptide repeat protein	Regulator
KIL00_RS20160 (KIL00_20160)	phrF	3846629..3846748 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
KIL00_RS20165 (KIL00_20165)	ywhH	3846846..3847283 (+)	438	Protein_3931	YbaK/EbsC family protein	-
KIL00_RS20170 (KIL00_20170)	speB	3847348..3848220 (-)	873	WP_003227545.1	agmatinase	-
KIL00_RS20175 (KIL00_20175)	speE	3848281..3849111 (-)	831	WP_003227543.1	spermidine synthase	-
KIL00_RS20180 (KIL00_20180)	pbpG	3849313..3851388 (+)	2076	WP_069837833.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45542.00 Da
• Isoelectric Point: 5.0624

>NTDB_id=568955 KIL00_RS20155 WP_213783484.1 3845500..3846645(+) (rapF) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYIS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=568955 KIL00_RS20155 WP_213783484.1 3845500..3846645(+) (rapF) [Bacillus subtilis subsp. subtilis strain A1 - Midalam]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACAGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATATTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57