Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KIP84_RS03390 Genome accession   NZ_CP075323
Coordinates   690491..690874 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter sp. BHS4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 685491..695874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP84_RS03380 (KIP84_03380) - 688391..689500 (-) 1110 WP_213689813.1 efflux RND transporter periplasmic adaptor subunit -
  KIP84_RS03385 (KIP84_03385) - 689569..690207 (-) 639 WP_213689334.1 hypothetical protein -
  KIP84_RS03390 (KIP84_03390) pilG 690491..690874 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  KIP84_RS03395 (KIP84_03395) - 690898..691260 (+) 363 WP_046811934.1 response regulator -
  KIP84_RS03400 (KIP84_03400) - 691317..691853 (+) 537 WP_069124013.1 chemotaxis protein CheW -
  KIP84_RS03405 (KIP84_03405) - 691900..693981 (+) 2082 WP_068565018.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=568765 KIP84_RS03390 WP_000389061.1 690491..690874(+) (pilG) [Acinetobacter sp. BHS4]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=568765 KIP84_RS03390 WP_000389061.1 690491..690874(+) (pilG) [Acinetobacter sp. BHS4]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGACGGTTATCAAACCTGTGCGCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATTATGCTCTCTAGTAAAGATGGTCTGTTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATCCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37