Detailed information NTG0568512

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: KI612_RS16650
• Genome accession: NZ_CP075188
• Coordinates: 3496082..3497434 (-)
• Length: 450 a.a.
• NCBI ID: WP_226441187.1
• Uniprot ID: -
• Organism: Quatrionicoccus australiensis strain D9
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3491082..3502434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KI612_RS16635 (KI612_16685)	-	3492461..3494305 (+)	1845	WP_226441184.1	phosphoenolpyruvate carboxykinase (GTP)	-
KI612_RS16640 (KI612_16690)	-	3494379..3495539 (+)	1161	WP_226441185.1	pyridoxal phosphate-dependent aminotransferase	-
KI612_RS16645 (KI612_16695)	ampD	3495516..3496085 (-)	570	WP_226441186.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
KI612_RS16650 (KI612_16700)	pilR	3496082..3497434 (-)	1353	WP_226441187.1	sigma-54 dependent transcriptional regulator	Regulator
KI612_RS16655 (KI612_16705)	-	3497425..3499002 (-)	1578	WP_226441188.1	PAS domain-containing sensor histidine kinase	-
KI612_RS16660 (KI612_16710)	-	3498999..3499229 (-)	231	WP_226441189.1	PP0621 family protein	-
KI612_RS16670 (KI612_16720)	ispB	3499624..3500553 (-)	930	WP_404818062.1	octaprenyl diphosphate synthase	-
KI612_RS16675 (KI612_16725)	-	3500734..3501837 (+)	1104	WP_226441191.1	HD domain-containing phosphohydrolase	-

Sequence

Protein

• Length: 450 a.a.
• Molecular weight: 49227.49 Da
• Isoelectric Point: 4.8866

>NTDB_id=568512 KI612_RS16650 WP_226441187.1 3496082..3497434(-) (pilR) [Quatrionicoccus australiensis strain D9]
MSLVNGERRPRGELARVLVVDDEPDIRELIDLTLARMGLVAECVGTVGEARQALAAERFQLCLTDMRLPDGDGLEIVRCI
TEQHAQTPVAVITAFGSAENAVAALKAGAFDYLAKPVGLDQLRTLVKSALRLPDVGAVNDDPLQSLIGDSPSMQQVRAMI
EKLARSQAPVYISGESGSGKELAARLIHLRSARSAGAFVPVNCGAIPENLMESEFFGYRKGAFTGADSDRDGFFQAASGG
TLFLDEVADLPLLMQVKLLRAIQEKRVRKVGSVTEEPVDVRIICATHRNLRECVDKGSFRQDLYYRLNVIELRMPPLRER
LEDIEPLVAAILQRLFGEAGPQLTAGAFKALGLYPFPGNVRELENILERATALCSGEVIEAADLHLEPEEMCGESLGRGS
ETLDDYLGRLERQAILEALQKTDGNRTAAARLLGVTFRSMRYRLERLGIE

Nucleotide

• Length: 1353 bp

>NTDB_id=568512 KI612_RS16650 WP_226441187.1 3496082..3497434(-) (pilR) [Quatrionicoccus australiensis strain D9]
GTGTCACTAGTAAATGGAGAACGACGTCCGCGTGGCGAGCTGGCCCGGGTTCTGGTCGTCGATGATGAACCCGACATCCG
CGAACTGATCGATCTGACGCTGGCGCGCATGGGGCTGGTGGCGGAATGTGTGGGCACGGTCGGCGAAGCGCGTCAGGCGC
TGGCGGCAGAACGTTTCCAGCTTTGTTTGACGGACATGCGCCTGCCGGATGGTGACGGGCTGGAAATCGTGCGCTGCATC
ACCGAGCAGCATGCGCAGACGCCGGTGGCGGTGATCACCGCCTTTGGCAGTGCGGAAAATGCAGTTGCGGCACTCAAGGC
GGGAGCATTCGACTATCTCGCCAAGCCGGTCGGGCTGGATCAGCTGCGCACCCTGGTCAAGTCGGCCTTGCGCTTGCCGG
ATGTCGGGGCGGTCAATGATGATCCGCTGCAGTCGCTGATCGGCGATTCGCCGAGCATGCAGCAGGTGCGGGCGATGATC
GAAAAACTGGCGCGCAGCCAGGCCCCTGTCTATATTTCCGGCGAGTCGGGGAGCGGCAAGGAGTTGGCGGCGCGTCTGAT
CCATTTGCGTAGTGCGCGTAGCGCCGGCGCCTTCGTGCCGGTCAACTGCGGTGCAATCCCGGAAAACCTGATGGAAAGCG
AGTTTTTCGGTTATCGCAAAGGCGCGTTCACCGGGGCCGACAGCGATCGTGACGGCTTTTTTCAGGCCGCCAGTGGCGGT
ACGCTGTTTCTCGACGAGGTCGCCGATCTGCCGCTGCTGATGCAGGTCAAGCTGCTGCGTGCGATCCAGGAAAAGCGCGT
GCGCAAGGTTGGCAGCGTCACCGAGGAGCCGGTGGATGTCCGCATCATCTGTGCGACGCACCGCAATTTGCGGGAGTGCG
TCGACAAGGGGAGCTTCCGTCAGGATTTGTATTACCGCCTGAATGTCATCGAGCTGCGCATGCCGCCGCTGCGCGAGCGT
CTGGAGGACATCGAGCCGCTCGTTGCGGCCATCTTGCAGCGCCTGTTTGGCGAGGCCGGGCCGCAACTGACGGCGGGTGC
ATTCAAGGCGCTCGGACTCTATCCATTCCCCGGCAATGTGCGCGAACTGGAGAATATTCTCGAGCGGGCGACCGCGCTTT
GTTCCGGCGAGGTCATCGAGGCGGCCGACCTGCATCTCGAGCCGGAGGAAATGTGCGGTGAAAGTCTCGGCCGCGGCAGC
GAGACGCTTGATGATTATCTTGGCCGCCTGGAGCGCCAGGCCATCCTTGAGGCGCTGCAGAAGACCGATGGCAACCGGAC
GGCGGCGGCTCGCCTGCTCGGTGTCACCTTCCGCTCGATGCGTTACCGGCTCGAACGGCTGGGCATCGAATGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (146-312)

• Response regulator receiver domain (Response_reg) (17-126)

• Bacterial regulatory protein, Fis family (HTH_8) (409-446)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.633	98.222	0.596
pilR	Acinetobacter baumannii strain A118	46.187	100	0.471
luxO	Vibrio cholerae strain A1552	37.838	98.667	0.373