Detailed information NTG0568456

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: KI615_RS05735
• Genome accession: NZ_CP075186
• Coordinates: 1176438..1177790 (+)
• Length: 450 a.a.
• NCBI ID: WP_226472567.1
• Uniprot ID: -
• Organism: Dechloromonas denitrificans strain G6
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1171438..1182790

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KI615_RS05715 (KI615_05690)	ovoA	1171715..1173826 (-)	2112	WP_226472565.1	5-histidylcysteine sulfoxide synthase	-
KI615_RS05720 (KI615_05695)	-	1174044..1174529 (+)	486	WP_226418763.1	hypothetical protein	-
KI615_RS05725 (KI615_05700)	-	1174637..1174870 (+)	234	WP_226418764.1	PP0621 family protein	-
KI615_RS05730 (KI615_05705)	-	1174870..1176480 (+)	1611	WP_226472566.1	sensor histidine kinase	-
KI615_RS05735 (KI615_05710)	pilR	1176438..1177790 (+)	1353	WP_226472567.1	sigma-54-dependent transcriptional regulator	Regulator
KI615_RS05740 (KI615_05715)	ampD	1177790..1178353 (+)	564	WP_226472568.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
KI615_RS05745 (KI615_05720)	-	1178330..1179490 (-)	1161	WP_226418768.1	pyridoxal phosphate-dependent aminotransferase	-
KI615_RS05750 (KI615_05725)	-	1179555..1181399 (-)	1845	WP_226418769.1	phosphoenolpyruvate carboxykinase (GTP)	-

Sequence

Protein

• Length: 450 a.a.
• Molecular weight: 49021.91 Da
• Isoelectric Point: 5.1868

>NTDB_id=568456 KI615_RS05735 WP_226472567.1 1176438..1177790(+) (pilR) [Dechloromonas denitrificans strain G6]
MSVARTERRPRGELTRILVVDDEADIRELIDLTLARMGLAAECVGSVAEARAALSAGSFQLCLTDMRLPDGEGLDIVRHI
GEHHAQTPVAVITAFGSAENAVAALKAGAFDYLAKPVGLEQLRALVKSALRLPDGGSESVDPLQSLIGDSPSMQQVRAMI
EKLARSQAPIYISGESGSGKELAARLIHTRSARSAGPFVPVNCGAIPENLMESEFFGYRKGAFTGADSDREGFFQAANGG
TLFLDEVADLPLAMQVKLLRAIQEKRVRKVGCVAEEAVDVRIICATHRNLRDCVDKGSFRQDLYYRLNVIELRMPPLRER
VEDIAPLVDSILRRLCGEVHPHLSAGALKALELYSFPGNVRELENILERATALSSSDGIEGEDLHLDPEEAAGEAVGRGS
ETLDDYLNRLERQAILEALQKTEGNRTAAARLLGVTFRSMRYRLERLGID

Nucleotide

• Length: 1353 bp

>NTDB_id=568456 KI615_RS05735 WP_226472567.1 1176438..1177790(+) (pilR) [Dechloromonas denitrificans strain G6]
GTGTCTGTTGCCAGAACCGAACGACGTCCGCGCGGCGAACTGACGCGGATTCTTGTCGTCGATGACGAAGCTGATATCCG
CGAACTGATCGACCTGACGCTGGCTCGCATGGGGCTGGCCGCCGAGTGCGTCGGTTCGGTGGCCGAGGCGCGGGCGGCGC
TGAGCGCCGGGAGCTTTCAGCTGTGCCTGACCGACATGCGTCTGCCGGACGGCGAGGGGCTGGATATCGTCCGCCACATT
GGCGAGCATCATGCCCAGACGCCGGTCGCCGTGATCACCGCCTTCGGCAGCGCCGAAAATGCAGTGGCCGCGCTGAAGGC
CGGAGCATTCGACTATCTGGCCAAACCGGTTGGCCTCGAGCAGTTGCGCGCCCTGGTCAAATCGGCGCTGCGCCTGCCGG
ATGGCGGGTCGGAGAGCGTCGATCCCTTGCAGTCGCTGATCGGCGATTCGCCGAGCATGCAGCAGGTGCGGGCGATGATC
GAGAAGCTGGCGCGCAGCCAGGCGCCGATCTACATTTCCGGCGAATCGGGCAGCGGCAAGGAACTGGCGGCCCGCCTGAT
CCATACGCGCAGCGCGCGCAGCGCCGGGCCGTTCGTTCCGGTGAACTGCGGCGCGATTCCGGAAAACCTGATGGAGAGCG
AGTTCTTCGGTTACCGGAAAGGCGCTTTCACCGGCGCCGACAGCGACCGCGAAGGCTTCTTCCAGGCGGCCAACGGCGGC
ACGCTGTTTCTCGACGAAGTGGCCGATCTGCCGCTCGCCATGCAGGTCAAACTGCTCCGCGCCATTCAGGAAAAGCGTGT
CCGCAAGGTCGGCTGCGTTGCCGAGGAGGCGGTCGATGTGCGGATCATCTGCGCGACGCACCGCAATTTGCGCGACTGCG
TCGACAAAGGCAGTTTCCGCCAGGATTTGTATTACCGCCTGAATGTCATCGAGTTGCGCATGCCGCCGCTGCGCGAGCGG
GTCGAGGATATCGCGCCGCTGGTCGACTCGATCCTCCGCCGCCTCTGTGGCGAGGTGCATCCGCATTTGTCGGCCGGAGC
CTTGAAGGCGCTCGAGTTGTACTCCTTCCCCGGCAATGTGCGCGAACTGGAAAACATCCTGGAGCGCGCCACCGCGCTCA
GTTCGAGCGACGGCATCGAGGGCGAGGATCTCCATCTCGATCCGGAAGAAGCGGCCGGCGAGGCAGTCGGGCGCGGCAGC
GAGACGCTCGACGACTACCTGAATCGCCTGGAGCGCCAGGCCATCCTCGAAGCCTTGCAGAAGACCGAGGGCAACCGCAC
GGCGGCGGCCCGCCTGCTCGGGGTGACGTTCCGCTCGATGCGCTATCGCCTGGAACGGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (409-446)

• Response regulator receiver domain (Response_reg) (17-126)

• Sigma-54 interaction domain (Sigma54_activat) (146-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.998	98	0.598
pilR	Acinetobacter baumannii strain A118	46.187	100	0.471
luxO	Vibrio cholerae strain A1552	37.639	99.778	0.376