Detailed information NTG0568432

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: KI611_RS05210
• Genome accession: NZ_CP075185
• Coordinates: 1064005..1065357 (+)
• Length: 450 a.a.
• NCBI ID: WP_226418766.1
• Uniprot ID: -
• Organism: Dechloromonas denitrificans strain 110
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1059005..1070357

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KI611_RS05190 (KI611_05150)	ovoA	1059282..1061393 (-)	2112	WP_226418762.1	5-histidylcysteine sulfoxide synthase	-
KI611_RS05195 (KI611_05155)	-	1061611..1062096 (+)	486	WP_226418763.1	hypothetical protein	-
KI611_RS05200 (KI611_05160)	-	1062204..1062437 (+)	234	WP_226418764.1	PP0621 family protein	-
KI611_RS05205 (KI611_05165)	-	1062437..1064047 (+)	1611	WP_226418765.1	sensor histidine kinase	-
KI611_RS05210 (KI611_05170)	pilR	1064005..1065357 (+)	1353	WP_226418766.1	sigma-54-dependent transcriptional regulator	Regulator
KI611_RS05215 (KI611_05175)	ampD	1065357..1065920 (+)	564	WP_226418767.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
KI611_RS05220 (KI611_05180)	-	1065897..1067057 (-)	1161	WP_226418768.1	pyridoxal phosphate-dependent aminotransferase	-
KI611_RS05225 (KI611_05185)	-	1067122..1068966 (-)	1845	WP_226418769.1	phosphoenolpyruvate carboxykinase (GTP)	-

Sequence

Protein

• Length: 450 a.a.
• Molecular weight: 48972.88 Da
• Isoelectric Point: 5.1028

>NTDB_id=568432 KI611_RS05210 WP_226418766.1 1064005..1065357(+) (pilR) [Dechloromonas denitrificans strain 110]
MSVARTERRPRGELTRILVVDDEADIRELIDLTLARMGLAAECVGSVAEARAALSAGSFQLCLTDMRLPDGEGLDIVRHI
GEHHAQTPVAVITAFGSAENAVAALKAGAFDYLAKPVGLEQLRALVKSALRLPDGGSESVDPLQSLIGDSPSMQQVRAMI
EKLARSQAPIYISGESGSGKELAARLIHTRSARSAGPFVPVNCGAIPENLMESEFFGYRKGAFTGADSDREGFFQAANGG
TLFLDEVADLPLAMQVKLLRAIQEKRVRKVGCVAEEAVDVRIICATHRNLRDCVDKGSFRQDLYYRLNVIELRMPPLRER
VEDIAPLVDSILRRLCGEAPPRLSAGALKALELYSFPGNVRELENILERATALSSSDGIEGEDLHLDPEEAAGEAVGRGS
ETLDDYLNRLERQAILEALQKTEGNRTAAARLLGVTFRSMRYRLERLGID

Nucleotide

• Length: 1353 bp

>NTDB_id=568432 KI611_RS05210 WP_226418766.1 1064005..1065357(+) (pilR) [Dechloromonas denitrificans strain 110]
GTGTCTGTTGCCAGAACCGAACGACGTCCGCGCGGCGAACTGACGCGGATTCTTGTCGTCGATGACGAAGCCGATATCCG
CGAACTGATCGACCTGACGCTGGCTCGCATGGGGCTGGCCGCCGAGTGCGTCGGTTCGGTGGCCGAGGCGCGGGCGGCGC
TGAGTGCCGGGAGCTTTCAGCTGTGTCTGACCGACATGCGCCTGCCGGACGGCGAGGGGCTGGATATCGTCCGCCACATT
GGCGAGCATCATGCCCAGACGCCGGTCGCCGTGATCACCGCCTTCGGCAGCGCCGAAAATGCGGTGGCCGCGCTGAAGGC
CGGAGCATTCGACTATCTGGCCAAGCCGGTCGGCCTCGAGCAGTTGCGCGCCCTGGTCAAATCGGCGCTGCGCCTGCCGG
ATGGCGGGTCGGAGAGCGTCGATCCCTTGCAGTCGCTGATCGGCGATTCGCCGAGCATGCAGCAGGTGCGGGCGATGATC
GAGAAGCTGGCGCGCAGCCAGGCGCCGATCTACATTTCCGGCGAATCGGGCAGCGGCAAGGAACTGGCGGCCCGCCTGAT
CCATACGCGCAGCGCGCGCAGCGCCGGGCCGTTCGTCCCGGTGAATTGCGGGGCGATTCCGGAAAACCTGATGGAGAGCG
AGTTCTTCGGTTACCGGAAAGGCGCTTTCACCGGCGCCGACAGCGACCGCGAAGGGTTCTTCCAGGCGGCCAATGGCGGC
ACGCTGTTTCTCGACGAAGTGGCCGATCTGCCGCTCGCCATGCAGGTTAAACTGCTCCGCGCCATCCAGGAAAAGCGCGT
CCGCAAGGTCGGCTGCGTCGCCGAGGAGGCCGTCGATGTGCGGATCATCTGCGCGACGCACCGCAATTTGCGCGACTGCG
TCGACAAAGGCAGTTTCCGCCAGGATCTGTATTACCGCCTGAATGTCATCGAGTTGCGCATGCCGCCGTTGCGCGAGCGG
GTTGAAGACATCGCGCCGCTGGTCGACTCGATCCTCCGCCGCCTCTGTGGCGAGGCGCCTCCGCGTTTGTCGGCCGGAGC
CTTGAAGGCGCTCGAGTTGTACTCCTTCCCCGGCAATGTGCGCGAACTGGAAAACATCCTGGAGCGGGCCACCGCGCTCA
GTTCGAGCGACGGCATCGAGGGCGAGGATCTCCATCTCGATCCGGAAGAAGCGGCCGGCGAGGCAGTCGGGCGCGGCAGC
GAGACGCTCGATGACTACCTGAATCGCCTGGAGCGCCAGGCCATCCTCGAAGCCTTGCAGAAAACCGAGGGCAACCGCAC
GGCGGCGGCCCGCCTGCTCGGGGTGACGTTCCGCTCGATGCGCTATCGCCTGGAACGGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (409-446)

• Response regulator receiver domain (Response_reg) (17-126)

• Sigma-54 interaction domain (Sigma54_activat) (146-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	61.224	98	0.6
pilR	Acinetobacter baumannii strain A118	46.623	100	0.476
luxO	Vibrio cholerae strain A1552	37.862	99.778	0.378