Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   KIP81_RS07340 Genome accession   NZ_CP075172
Coordinates   1479587..1480591 (-) Length   334 a.a.
NCBI ID   WP_021142864.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1474587..1485591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS07325 (KIP81_07320) thrS 1474873..1476819 (-) 1947 WP_074639445.1 threonine--tRNA ligase -
  KIP81_RS07330 (KIP81_07325) - 1477170..1478504 (-) 1335 WP_243602710.1 glycosyltransferase family 4 protein -
  KIP81_RS07335 (KIP81_07330) - 1478506..1479504 (-) 999 WP_243602711.1 glycosyltransferase -
  KIP81_RS07340 (KIP81_07335) ccpA 1479587..1480591 (-) 1005 WP_021142864.1 catabolite control protein A Regulator
  KIP81_RS07345 (KIP81_07340) - 1480932..1482017 (+) 1086 WP_074479904.1 Xaa-Pro peptidase family protein -
  KIP81_RS07350 (KIP81_07345) - 1482052..1482378 (-) 327 WP_243602712.1 multidrug efflux SMR transporter -
  KIP81_RS07355 (KIP81_07350) - 1482506..1483000 (+) 495 WP_074566759.1 NUDIX domain-containing protein -
  KIP81_RS07360 (KIP81_07355) - 1483017..1483907 (-) 891 WP_074629338.1 LysR family transcriptional regulator -
  KIP81_RS07365 (KIP81_07360) - 1484085..1484813 (+) 729 WP_004232843.1 DUF554 domain-containing protein -
  KIP81_RS07370 (KIP81_07365) - 1484995..1485429 (+) 435 WP_074566765.1 MarR family transcriptional regulator -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 36727.77 Da        Isoelectric Point: 5.3038

>NTDB_id=568261 KIP81_RS07340 WP_021142864.1 1479587..1480591(-) (ccpA) [Streptococcus equinus strain SheepZ001]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILARGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKDIAFVSGPLIDEINGKVRLAGYKEGLEKNNLSFKEGLVFEANYNYKDGYELAQRVMNSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
ILNHGLKLRGTSRQ

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=568261 KIP81_RS07340 WP_021142864.1 1479587..1480591(-) (ccpA) [Streptococcus equinus strain SheepZ001]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCACGTGAAGCCGGCGTCTCAATGGCAACAGTTAGTCGTGTTGT
AAATGGTAATAAAAATGTAAAGGAAAACACTCGTAAAAAAGTCCTTGAAGTTATTGACCGTTTAGACTATCGTCCAAATG
CAGTTGCTCGTGGTTTGGCAAGTAAGAAAACGACAACTGTTGGTGTTGTTATTCCAAATATCGCTAATAGCTATTTCTCA
ATTTTAGCGAGAGGGATTGATGACATTGCTGCTATGTACAAATACAATATCGTTCTTGCATCAAGTGATGAAGATGACGA
TAAAGAAGTTAATGTCGTAAATACTTTGTTTGCTAAACAAGTAGATGGTATTATCTTCATGGGTCACCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTTGTTCTAGCAGGGACAGTTGATTTAGAACATCAACTTCCAAGT
GTTAATATTGATTACAAAGCTGCTGTAGCAGATGTTGTTGATATTTTAGCTAAAAACAATAAAGATATTGCCTTTGTTTC
AGGACCACTTATTGACGAAATCAATGGTAAAGTTCGTCTTGCTGGTTACAAAGAAGGACTTGAAAAGAACAATCTTTCAT
TCAAAGAAGGACTTGTATTTGAAGCAAACTATAACTACAAAGATGGTTATGAGCTTGCTCAACGTGTGATGAACTCAGGT
GCAACAGCTGCTTATGTAGCTGAAGATGAATTAGCTGCAGGTCTTTTGAACGGCTTGTTTGCTGCAGGTAAAAAAGTTCC
TGAAGACTTTGAAATCATTACAAGTAATGACTCACCTATTACTTCATACACACGTCCAAACCTTAGCTCAATCAGTCAAC
CGGTTTATGACCTTGGAGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAAGAACTTGAAGAAAAAGAAATC
ATTCTTAATCATGGTCTTAAATTACGTGGTACATCACGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.042

100

0.79

  ccpA Streptococcus pneumoniae D39

76.347

100

0.763

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.102

0.56