Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   MK801_RS09480 Genome accession   NZ_CP092748
Coordinates   1890658..1891440 (-) Length   260 a.a.
NCBI ID   WP_057719678.1    Uniprot ID   -
Organism   Lactococcus lactis strain 17M1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1885658..1896440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MK801_RS09450 (MK801_09445) - 1885963..1886952 (-) 990 WP_057719675.1 mevalonate kinase -
  MK801_RS09455 (MK801_09450) mvaD 1886939..1887895 (-) 957 WP_254255519.1 diphosphomevalonate decarboxylase -
  MK801_RS09460 (MK801_09455) mvk 1888201..1889133 (+) 933 WP_003131564.1 mevalonate kinase -
  MK801_RS09465 (MK801_09460) - 1889196..1889387 (+) 192 WP_012897234.1 hypothetical protein -
  MK801_RS09470 (MK801_09465) rsmI 1889464..1890339 (-) 876 WP_010905318.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  MK801_RS09475 (MK801_09470) yabA 1890339..1890665 (-) 327 WP_015425850.1 DNA replication initiation control protein YabA -
  MK801_RS09480 (MK801_09475) yaaT 1890658..1891440 (-) 783 WP_057719678.1 stage 0 sporulation family protein Regulator
  MK801_RS09485 (MK801_09480) - 1891492..1892352 (-) 861 WP_057719679.1 DNA polymerase III subunit delta' -
  MK801_RS09490 (MK801_09485) tmk 1892485..1893120 (-) 636 WP_015425847.1 dTMP kinase -
  MK801_RS09495 (MK801_09490) yycF 1893298..1893999 (+) 702 WP_003131580.1 response regulator YycF -
  MK801_RS09500 (MK801_09495) vicK 1893992..1895434 (+) 1443 WP_254255520.1 ATP-binding protein Regulator
  MK801_RS09505 (MK801_09500) vicX 1895604..1896416 (+) 813 WP_254255521.1 MBL fold metallo-hydrolase Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29812.28 Da        Isoelectric Point: 6.2493

>NTDB_id=568064 MK801_RS09480 WP_057719678.1 1890658..1891440(-) (yaaT) [Lactococcus lactis strain 17M1]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRHLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=568064 MK801_RS09480 WP_057719678.1 1890658..1891440(-) (yaaT) [Lactococcus lactis strain 17M1]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGATCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATAGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCACCTTGTCATTGAACAAGGTTTAGAAATGAAAATTATTGATGTTGCTTATAATTTTGACCAAATGCA
ACTTTTTATTTCGTTTACGGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCGAAAATTCATGGTGGACTTGGACCTTGTGGGCGTCCTTTATGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTAAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACTTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTGAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388