Detailed information NTG0056643

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPOK310_RS01715
• Genome accession: NC_020509
• Coordinates: 348585..349385 (+)
• Length: 266 a.a.
• NCBI ID: WP_015428729.1
• Uniprot ID: -
• Organism: Helicobacter pylori OK310
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 343585..354385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOK310_RS01680 (HPOK310_0332)	pseH	344079..344621 (+)	543	WP_015427530.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPOK310_RS01685 (HPOK310_0333)	-	344554..345492 (-)	939	WP_015428725.1	tetraacyldisaccharide 4'-kinase	-
HPOK310_RS01690 (HPOK310_0334)	-	345489..346271 (-)	783	WP_015428726.1	NAD+ synthase	-
HPOK310_RS01700 (HPOK310_0335)	ilvC	346520..347512 (+)	993	WP_015428727.1	ketol-acid reductoisomerase	-
HPOK310_RS01705 (HPOK310_0336)	minD	347537..348343 (+)	807	WP_015428728.1	septum site-determining protein MinD	-
HPOK310_RS01710 (HPOK310_0337)	minE	348340..348573 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPOK310_RS01715 (HPOK310_0338)	dprA	348585..349385 (+)	801	WP_015428729.1	DNA-processing protein DprA	Machinery gene
HPOK310_RS01720 (HPOK310_0339)	dprB	349382..349786 (+)	405	WP_015428730.1	Holliday junction resolvase RuvX	Machinery gene
HPOK310_RS01725 (HPOK310_0340)	-	349913..350275 (+)	363	WP_015428731.1	tetratricopeptide repeat protein	-
HPOK310_RS01730 (HPOK310_0341)	-	350464..350802 (+)	339	WP_015428732.1	hypothetical protein	-
HPOK310_RS01735 (HPOK310_0342)	-	350786..351346 (+)	561	WP_015428733.1	hypothetical protein	-
HPOK310_RS01740 (HPOK310_0343)	-	351357..351521 (+)	165	WP_015428734.1	hypothetical protein	-
HPOK310_RS08530 (HPOK310_0345)	-	351771..352038 (+)	268	Protein_341	lysozyme	-
HPOK310_RS07895	-	352417..352741 (+)	325	Protein_342	DUF1294 domain-containing protein	-
HPOK310_RS01755 (HPOK310_0347)	-	352741..353526 (+)	786	WP_015428738.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29790.76 Da
• Isoelectric Point: 8.5925

>NTDB_id=56643 HPOK310_RS01715 WP_015428729.1 348585..349385(+) (dprA) [Helicobacter pylori OK310]
MKSNFQYSVLENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=56643 HPOK310_RS01715 WP_015428729.1 348585..349385(+) (dprA) [Helicobacter pylori OK310]
ATGAAAAGCAACTTCCAATACAGCGTGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTAATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGTGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGACAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGCAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414