Detailed information NTG0056619

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPOK113_RS01770
• Genome accession: NC_020508
• Coordinates: 350994..351794 (+)
• Length: 266 a.a.
• NCBI ID: WP_015427535.1
• Uniprot ID: -
• Organism: Helicobacter pylori OK113
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 345994..356794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPOK113_RS01735 (HPOK113_0335)	pseH	346486..347028 (+)	543	WP_015427530.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPOK113_RS01740 (HPOK113_0336)	-	346961..347899 (-)	939	WP_015427531.1	tetraacyldisaccharide 4'-kinase	-
HPOK113_RS01745 (HPOK113_0337)	-	347896..348678 (-)	783	WP_015427532.1	NAD+ synthase	-
HPOK113_RS01755 (HPOK113_0338)	ilvC	348929..349921 (+)	993	WP_015427533.1	ketol-acid reductoisomerase	-
HPOK113_RS01760 (HPOK113_0339)	minD	349946..350752 (+)	807	WP_015427534.1	septum site-determining protein MinD	-
HPOK113_RS01765 (HPOK113_0340)	minE	350749..350982 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPOK113_RS01770 (HPOK113_0341)	dprA	350994..351794 (+)	801	WP_015427535.1	DNA-processing protein DprA	Machinery gene
HPOK113_RS01775 (HPOK113_0342)	dprB	351791..352195 (+)	405	WP_015427536.1	Holliday junction resolvase RuvX	Machinery gene
HPOK113_RS01780 (HPOK113_0343)	-	352362..352526 (+)	165	WP_015427537.1	SEL1-like repeat protein	-
HPOK113_RS01785 (HPOK113_0344)	-	352772..353110 (+)	339	WP_015427538.1	hypothetical protein	-
HPOK113_RS01790 (HPOK113_0345)	-	353094..353654 (+)	561	WP_015427539.1	hypothetical protein	-
HPOK113_RS01795 (HPOK113_0346)	-	353683..353916 (+)	234	WP_015427540.1	glycoside hydrolase family protein	-
HPOK113_RS01800 (HPOK113_0347)	-	354083..354349 (+)	267	WP_000404335.1	hypothetical protein	-
HPOK113_RS08780	-	354407..354535 (+)	129	WP_029646076.1	hypothetical protein	-
HPOK113_RS08035	-	354688..355069 (+)	382	Protein_346	DUF1294 domain-containing protein	-
HPOK113_RS01820 (HPOK113_0349)	-	355069..355857 (+)	789	WP_015427543.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29886.79 Da
• Isoelectric Point: 9.0865

>NTDB_id=56619 HPOK113_RS01770 WP_015427535.1 350994..351794(+) (dprA) [Helicobacter pylori OK113]
MKSNFQYSALEDIPKAFDILKDPPKKLYYAGDIKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLTQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=56619 HPOK113_RS01770 WP_015427535.1 350994..351794(+) (dprA) [Helicobacter pylori OK113]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGGATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTATGCGGGCGATATAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAACCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAACTTTTAGAGAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAATACCCTTTTAAAAGACC
ATCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCAAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATTGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	94.737	100	0.947
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.035	86.09	0.414