Detailed information NTG0564586

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KHA81_RS17120
• Genome accession: NZ_CP074391
• Coordinates: 3464974..3466137 (-)
• Length: 387 a.a.
• NCBI ID: WP_015387626.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain L-17
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3459974..3471137

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHA81_RS17090	-	3460239..3460658 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
KHA81_RS17095	comFC	3460732..3461421 (-)	690	WP_196758106.1	phosphoribosyltransferase family protein	Machinery gene
KHA81_RS17100	-	3461427..3461711 (-)	285	WP_003151389.1	competence protein ComFB	-
KHA81_RS17105	comFA	3461769..3463154 (-)	1386	WP_015387627.1	DEAD/DEAH box helicase	Machinery gene
KHA81_RS17110	-	3463262..3464110 (-)	849	WP_003151387.1	DegV family protein	-
KHA81_RS17115	degU	3464208..3464897 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KHA81_RS17120	degS	3464974..3466137 (-)	1164	WP_015387626.1	two-component sensor histidine kinase DegS	Regulator
KHA81_RS17125	-	3466360..3467007 (+)	648	WP_003151384.1	YigZ family protein	-
KHA81_RS17130	-	3467012..3468226 (+)	1215	WP_015387625.1	LCP family protein	-
KHA81_RS17135	-	3468316..3469392 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
KHA81_RS17140	-	3469525..3470721 (-)	1197	WP_003151381.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44971.80 Da
• Isoelectric Point: 6.8616

>NTDB_id=564586 KHA81_RS17120 WP_015387626.1 3464974..3466137(-) (degS) [Bacillus amyloliquefaciens strain L-17]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLLERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=564586 KHA81_RS17120 WP_015387626.1 3464974..3466137(-) (degS) [Bacillus amyloliquefaciens strain L-17]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCTGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.065	99.483	0.946