Detailed information NTG0563919

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: MAK06_RS07925
• Genome accession: NZ_CP091876
• Coordinates: 1644117..1644719 (-)
• Length: 200 a.a.
• NCBI ID: WP_000271549.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain FRI-1169
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1639117..1649719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MAK06_RS07905 (MAK06_05960)	yajC	1640613..1640873 (-)	261	WP_001160682.1	preprotein translocase subunit YajC	-
MAK06_RS07910 (MAK06_05955)	tgt	1640892..1642031 (-)	1140	WP_001112045.1	tRNA guanosine(34) transglycosylase Tgt	-
MAK06_RS07915 (MAK06_05950)	queA	1642054..1643079 (-)	1026	WP_001019172.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
MAK06_RS07920 (MAK06_05945)	ruvB	1643081..1644085 (-)	1005	WP_001005767.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
MAK06_RS07925 (MAK06_05940)	ruvA	1644117..1644719 (-)	603	WP_000271549.1	Holliday junction branch migration protein RuvA	Machinery gene
MAK06_RS07930 (MAK06_05935)	-	1644733..1645188 (-)	456	WP_000368902.1	ACT domain-containing protein	-
MAK06_RS07935 (MAK06_05930)	obgE	1645201..1646493 (-)	1293	WP_000496100.1	GTPase ObgE	-
MAK06_RS07940 (MAK06_05925)	rpmA	1646848..1647132 (-)	285	WP_000916187.1	50S ribosomal protein L27	-
MAK06_RS07945 (MAK06_05920)	-	1647144..1647464 (-)	321	WP_000633692.1	ribosomal-processing cysteine protease Prp	-
MAK06_RS07950 (MAK06_05915)	rplU	1647470..1647778 (-)	309	WP_000457386.1	50S ribosomal protein L21	-
MAK06_RS07955 (MAK06_05910)	mreD	1647945..1648475 (-)	531	WP_001259925.1	rod shape-determining protein MreD	-
MAK06_RS07960 (MAK06_05905)	mreC	1648475..1649317 (-)	843	WP_000911041.1	rod shape-determining protein MreC	-
MAK06_RS07965 (MAK06_05900)	-	1649517..1649636 (-)	120	WP_000840602.1	hypothetical protein	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 22276.48 Da
• Isoelectric Point: 6.0255

>NTDB_id=563919 MAK06_RS07925 WP_000271549.1 1644117..1644719(-) (ruvA) [Staphylococcus aureus strain FRI-1169]
MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLYGFSSEEEKEMFLSLIKVTGI
GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML
ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS

Nucleotide

• Length: 603 bp

>NTDB_id=563919 MAK06_RS07925 WP_000271549.1 1644117..1644719(-) (ruvA) [Staphylococcus aureus strain FRI-1169]
ATGTACGCGTATGTCAAAGGTAAGTTAACACATTTATATCCTACACACGTAGTTGTTGAAACTGCTGGTGTTGGTTATGA
AATTCAAACACCAAATTCTTATCGTTTTCAAAAGCATCTAGATCATGAAGTTTTAATTCATACATCTTTAATTGTTCGTG
AAGATGCACAATTATTGTATGGATTTAGTAGTGAAGAAGAGAAAGAGATGTTCTTGAGTTTAATTAAAGTTACTGGTATT
GGTCCGAAATCAGCTTTAGCTATTTTAGCGACAAGTACGCCTAATGAAGTAAAACGTGCCATTGAAAATGAAAATGATAC
GTATTTAACTAAATTCCCAGGAATTGGTAAGAAAACGGCAAGACAGATTGTCTTAGATTTAAAAGGTAAAGTGAAAATTA
CTGAAGAAGATAGCGATTCATTATTACAAGTAGACGCTACTTCGACGGTGCAAGATCAATTCGTGCAAGAAGCAATGTTA
GCGTTAGAAGCATTAGGTTATTCTAAACGAGAGCTTGCAAAAGTTGAGAAAACGTTAAATAAAAATAAATATGACTCAGT
TGATGAAGCTGTTAAGGCAGGTCTTCAATTAGTTGTATCTTAA

Domains

Predicted by InterProScan.

• RuvA N terminal domain (RuvA_N) (1-61)

• Helix-hairpin-helix domain (HHH_5) (71-128)

• RuvA, C-terminal domain (RuvA_C) (156-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	46.231	99.5	0.46
ruvA	Streptococcus pneumoniae R6	45.729	99.5	0.455
ruvA	Streptococcus pneumoniae D39	45.729	99.5	0.455
ruvA	Bacillus subtilis subsp. subtilis str. 168	42.714	99.5	0.425