Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   KFQ09_RS17455 Genome accession   NZ_CP074101
Coordinates   3401032..3401325 (+) Length   97 a.a.
NCBI ID   WP_008342186.1    Uniprot ID   A0A5K1NAM4
Organism   Bacillus sp. FS02     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3396032..3406325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KFQ09_RS17425 - 3396536..3396778 (-) 243 WP_003217440.1 DUF2626 domain-containing protein -
  KFQ09_RS17430 - 3396991..3397371 (+) 381 WP_007501232.1 Spx/MgsR family RNA polymerase-binding regulatory protein -
  KFQ09_RS17440 - 3397597..3398466 (+) 870 WP_017367596.1 STAS domain-containing protein -
  KFQ09_RS17445 comGA 3398924..3399994 (+) 1071 WP_017357987.1 competence type IV pilus ATPase ComGA Machinery gene
  KFQ09_RS17450 comGB 3399975..3401015 (+) 1041 WP_255835847.1 competence type IV pilus assembly protein ComGB -
  KFQ09_RS17455 comGC 3401032..3401325 (+) 294 WP_008342186.1 competence type IV pilus major pilin ComGC Machinery gene
  KFQ09_RS17460 comGD 3401318..3401764 (+) 447 WP_017367594.1 competence type IV pilus minor pilin ComGD -
  KFQ09_RS17465 comGE 3401748..3402062 (+) 315 WP_017367593.1 competence type IV pilus minor pilin ComGE -
  KFQ09_RS17470 comGF 3402004..3402501 (+) 498 WP_017367592.1 competence type IV pilus minor pilin ComGF -
  KFQ09_RS17475 comGG 3402498..3402881 (+) 384 WP_017357982.1 competence type IV pilus minor pilin ComGG -
  KFQ09_RS17480 - 3402942..3403130 (+) 189 WP_017367591.1 YqzE family protein -
  KFQ09_RS17485 - 3403166..3403492 (-) 327 WP_017367590.1 DUF3889 domain-containing protein -
  KFQ09_RS17490 tapA 3403745..3404272 (+) 528 WP_017367589.1 amyloid fiber anchoring/assembly protein TapA -
  KFQ09_RS17495 sipW 3404323..3404895 (+) 573 WP_017357979.1 signal peptidase I SipW -
  KFQ09_RS17500 tasA 3404954..3405753 (+) 800 Protein_3392 biofilm matrix protein TasA -
  KFQ09_RS17505 sinR 3405821..3406156 (-) 336 WP_017357978.1 transcriptional regulator SinR Regulator

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10728.62 Da        Isoelectric Point: 6.7081

>NTDB_id=563292 KFQ09_RS17455 WP_008342186.1 3401032..3401325(+) (comGC) [Bacillus sp. FS02]
MNDKGFTLLEMLIVMLVISILLLITIPNITRHHQSIQAKGCEGLKSMVSTQVMAYELEHDGKTPSLAELEKEGYVKKGLT
CPNGKAIFIQNGDVKNE

Nucleotide


Download         Length: 294 bp        

>NTDB_id=563292 KFQ09_RS17455 WP_008342186.1 3401032..3401325(+) (comGC) [Bacillus sp. FS02]
ATGAATGATAAAGGATTTACACTGTTAGAAATGTTAATTGTCATGCTTGTGATCTCCATTCTTTTATTGATCACCATTCC
AAATATCACTCGGCATCATCAAAGCATTCAAGCAAAGGGCTGTGAAGGGCTGAAATCAATGGTGAGTACACAGGTAATGG
CATATGAATTAGAGCATGACGGCAAGACGCCATCTTTAGCTGAATTAGAAAAAGAAGGCTATGTCAAAAAAGGATTAACT
TGTCCGAATGGAAAGGCAATTTTCATTCAAAACGGGGATGTGAAAAATGAATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAM4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

67.01

100

0.67
  comGC Staphylococcus aureus MW2

41.304

94.845

0.392
  comGC Staphylococcus aureus N315

41.304

94.845

0.392