Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   L3080_RS09405 Genome accession   NZ_CP091465
Coordinates   2004627..2005262 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain NCCP 16007     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1999627..2010262
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L3080_RS09390 - 2000414..2001598 (+) 1185 WP_000942504.1 S41 family peptidase -
  L3080_RS09395 - 2001602..2003023 (-) 1422 WP_000840549.1 sigma-54-dependent transcriptional regulator -
  L3080_RS09400 pilS 2003048..2004616 (-) 1569 WP_001160333.1 sensor histidine kinase Regulator
  L3080_RS09405 letA 2004627..2005262 (-) 636 WP_000633799.1 response regulator Regulator
  L3080_RS09410 pbpG 2005475..2006521 (+) 1047 WP_003384760.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  L3080_RS09415 thrC 2006628..2007767 (-) 1140 WP_000063593.1 threonine synthase -
  L3080_RS09420 - 2007823..2009124 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  L3080_RS09425 - 2009369..2010184 (-) 816 WP_000011159.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=561709 L3080_RS09405 WP_000633799.1 2004627..2005262(-) (letA) [Acinetobacter baumannii strain NCCP 16007]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=561709 L3080_RS09405 WP_000633799.1 2004627..2005262(-) (letA) [Acinetobacter baumannii strain NCCP 16007]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCAGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAACCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55