Detailed information NTG0056076

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KSO_RS02630
• Genome accession: NC_020272
• Coordinates: 518182..519345 (+)
• Length: 387 a.a.
• NCBI ID: WP_015387626.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens IT-45
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 513182..524345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KSO_RS02610 (KSO_002725)	tuaH	513598..514794 (+)	1197	WP_003151381.1	teichuronic acid biosynthesis protein TuaH	-
KSO_RS02615 (KSO_002730)	-	514927..516003 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
KSO_RS02620 (KSO_002735)	-	516093..517307 (-)	1215	WP_015387625.1	LCP family protein	-
KSO_RS02625 (KSO_002740)	-	517312..517959 (-)	648	WP_003151384.1	YigZ family protein	-
KSO_RS02630 (KSO_002745)	degS	518182..519345 (+)	1164	WP_015387626.1	two-component sensor histidine kinase DegS	Regulator
KSO_RS02635 (KSO_002750)	degU	519422..520111 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KSO_RS02640 (KSO_002755)	-	520209..521057 (+)	849	WP_003151387.1	DegV family protein	-
KSO_RS02645 (KSO_002760)	comFA	521165..522550 (+)	1386	WP_015387627.1	DEAD/DEAH box helicase	Machinery gene
KSO_RS02650 (KSO_002765)	-	522608..522892 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
KSO_RS02655 (KSO_002770)	comFC	522898..523587 (+)	690	WP_196758106.1	phosphoribosyltransferase family protein	Machinery gene
KSO_RS02660 (KSO_002775)	-	523661..524080 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44971.80 Da
• Isoelectric Point: 6.8616

>NTDB_id=56076 KSO_RS02630 WP_015387626.1 518182..519345(+) (degS) [Bacillus amyloliquefaciens IT-45]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLLERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=56076 KSO_RS02630 WP_015387626.1 518182..519345(+) (degS) [Bacillus amyloliquefaciens IT-45]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCTGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.065	99.483	0.946