Detailed information NTG0056034

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: C663_RS17330
• Genome accession: NC_020244
• Coordinates: 3466159..3467316 (-)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus subtilis XF-1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3461159..3472316

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C663_RS17300 (C663_3430)	yvyF	3461412..3461831 (-)	420	WP_003227995.1	TIGR03826 family flagellar region protein	-
C663_RS17305 (C663_3431)	comFC	3461905..3462627 (-)	723	WP_015384784.1	comF operon protein ComFC	Machinery gene
C663_RS17310	comFB	3462591..3462887 (-)	297	WP_015483764.1	late competence protein ComFB	-
C663_RS17315 (C663_3433)	comFA	3462947..3464338 (-)	1392	WP_015384785.1	ATP-dependent helicase ComFA	Machinery gene
C663_RS17320 (C663_3434)	fakBA	3464444..3465289 (-)	846	WP_003227986.1	DegV family protein	-
C663_RS17325 (C663_3435)	degU	3465387..3466076 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
C663_RS17330	degS	3466159..3467316 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
C663_RS17335 (C663_3436)	yvyE	3467533..3468186 (+)	654	WP_003227979.1	YigZ family protein	-
C663_RS17340 (C663_3437)	tagV	3468186..3469361 (+)	1176	WP_015251114.1	polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV	-
C663_RS17345 (C663_3438)	tagO	3469434..3470510 (-)	1077	WP_003227975.1	MraY family glycosyltransferase	-
C663_RS17350 (C663_3439)	tuaH	3470655..3471848 (-)	1194	WP_080030751.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=56034 C663_RS17330 WP_003227983.1 3466159..3467316(-) (degS) [Bacillus subtilis XF-1]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=56034 C663_RS17330 WP_003227983.1 3466159..3467316(-) (degS) [Bacillus subtilis XF-1]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATTGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAGATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1