Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   KEM15_RS03055 Genome accession   NZ_CP073632
Coordinates   586819..587820 (+) Length   333 a.a.
NCBI ID   WP_217375145.1    Uniprot ID   -
Organism   Streptococcus parasuis strain NN1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 581819..592820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KEM15_RS03035 (KEM15_02995) - 581938..582795 (-) 858 WP_274504667.1 DUF975 family protein -
  KEM15_RS03040 (KEM15_03000) tgt 583063..584205 (+) 1143 WP_217374812.1 tRNA guanosine(34) transglycosylase Tgt -
  KEM15_RS03045 (KEM15_03005) - 584324..585380 (+) 1057 Protein_559 IS630 family transposase -
  KEM15_RS03050 (KEM15_03010) - 585528..586613 (-) 1086 WP_217374813.1 Xaa-Pro peptidase family protein -
  KEM15_RS03055 (KEM15_03015) ccpA 586819..587820 (+) 1002 WP_217375145.1 catabolite control protein A Regulator
  KEM15_RS03060 (KEM15_03020) - 587937..588980 (+) 1044 WP_274504668.1 glycosyltransferase family 4 protein -
  KEM15_RS03065 (KEM15_03025) - 589001..590314 (+) 1314 WP_274504669.1 glycosyltransferase family 4 protein -
  KEM15_RS03070 (KEM15_03030) - 590329..590703 (+) 375 WP_274504670.1 hypothetical protein -
  KEM15_RS03075 - 590966..591337 (+) 372 Protein_565 MazG-like protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36790.81 Da        Isoelectric Point: 5.5299

>NTDB_id=559506 KEM15_RS03055 WP_217375145.1 586819..587820(+) (ccpA) [Streptococcus parasuis strain NN1]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANVYFA
TLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYAAASSDAVKLLAKNNKKIAFVSGPLVDDINGKIRFSGYKEGLQANGLEFNEGLVFESKYKYEEGYALAERVLNAG
ATAAYVAEDEIAAGLLNGISDRGIKVPEEFEIITSDDSQVTKYTRPNLTSINQPIYDIGAIAMRMLTKIMHKEELDNREV
ILNHGIKERKSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=559506 KEM15_RS03055 WP_217375145.1 586819..587820(+) (ccpA) [Streptococcus parasuis strain NN1]
ATGAATACAGACGATACCGTGACGATTTATGACGTTGCGCGTGAAGCTGGTGTGTCAATGGCTACAGTCAGTCGTGTAGT
CAATGGTAATAAAAATGTCAAAGAAAACACTCGCAAAAAAGTGTTAGAGGTGATTGATCGATTAGATTATCGCCCAAATG
CTGTTGCGCGTGGTTTGGCAAGTAAAAAAACGACAACTGTGGGGGTTGTGATTCCAAATATTGCCAATGTCTATTTTGCA
ACCTTGGCTAAGGGGATTGATGACATTGCTGATATGTATAAGTATAATATCGTATTGGCAAACAGTGATGAAAATGACGA
GAAAGAAATTAATGTTGTCAATACATTGTTTTCTAAGCAAGTTGATGGTATTATCTTCATGGGCTATCATCTGACAGATA
AGATTCGTGCGGAATTTTCACGTTCACGCACTCCGATTGTATTAGCAGGTACTGTCGATTTGGAACACCAATTGCCAAGT
GTCAATATTGACTACGCAGCTGCAAGTAGTGATGCAGTAAAATTGCTTGCTAAAAATAACAAAAAAATCGCCTTTGTTTC
AGGTCCATTGGTTGATGACATTAATGGGAAAATTCGTTTTTCTGGTTACAAAGAAGGACTCCAAGCGAATGGTTTAGAGT
TTAATGAAGGTCTTGTCTTTGAATCAAAATACAAATATGAAGAAGGCTATGCCTTGGCGGAACGTGTCTTGAATGCGGGA
GCAACTGCAGCATATGTTGCTGAAGATGAAATCGCTGCCGGTTTGTTAAATGGTATTAGTGATCGTGGTATAAAGGTTCC
TGAAGAATTTGAAATCATTACAAGTGATGATTCACAGGTAACAAAATATACTCGTCCAAATCTGACGTCCATCAATCAAC
CGATTTACGATATTGGCGCAATTGCCATGCGTATGTTGACAAAAATTATGCACAAGGAAGAATTGGATAATCGCGAAGTT
ATCTTGAATCATGGTATCAAGGAACGTAAATCTACAAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.58

100

0.796
  ccpA Streptococcus pneumoniae D39

78.979

100

0.79
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.61

99.399

0.583