Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   KCL43_RS04765 Genome accession   NZ_CP073275
Coordinates   1003266..1004576 (+) Length   436 a.a.
NCBI ID   WP_165623301.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain IN-6992     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 998266..1009576
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCL43_RS04750 (KCL43_04750) phoU 998748..999401 (+) 654 WP_012678018.1 phosphate signaling complex protein PhoU -
  KCL43_RS04755 (KCL43_04755) - 999635..1002172 (+) 2538 WP_043052123.1 M1 family metallopeptidase -
  KCL43_RS04760 (KCL43_04760) ciaR 1002599..1003273 (+) 675 WP_043983576.1 response regulator transcription factor Regulator
  KCL43_RS04765 (KCL43_04765) ciaH 1003266..1004576 (+) 1311 WP_165623301.1 sensor histidine kinase Regulator
  KCL43_RS04770 (KCL43_04770) - 1004959..1005351 (+) 393 WP_024273227.1 hypothetical protein -
  KCL43_RS04775 (KCL43_04775) - 1005520..1005846 (+) 327 WP_014623416.1 hypothetical protein -
  KCL43_RS10535 - 1005878..1006080 (+) 203 Protein_919 hypothetical protein -
  KCL43_RS04780 (KCL43_04780) - 1006126..1006527 (+) 402 WP_042670593.1 hypothetical protein -
  KCL43_RS04785 (KCL43_04785) - 1006529..1006774 (+) 246 WP_021320712.1 hypothetical protein -
  KCL43_RS04790 (KCL43_04790) - 1006790..1007197 (+) 408 WP_165623229.1 hypothetical protein -
  KCL43_RS04795 (KCL43_04795) - 1007207..1007497 (+) 291 WP_021320713.1 hypothetical protein -
  KCL43_RS04800 (KCL43_04800) - 1007421..1007804 (+) 384 WP_012678013.1 hypothetical protein -
  KCL43_RS04805 (KCL43_04805) - 1007806..1008057 (+) 252 WP_212573379.1 hypothetical protein -
  KCL43_RS04810 (KCL43_04810) - 1008229..1008612 (+) 384 WP_041790456.1 hypothetical protein -
  KCL43_RS04815 (KCL43_04815) - 1008609..1008869 (+) 261 WP_012678010.1 hypothetical protein -
  KCL43_RS04820 (KCL43_04820) - 1008885..1009298 (+) 414 WP_041790454.1 hypothetical protein -

Sequence

Protein


Download         Length: 436 a.a.        Molecular weight: 49676.30 Da        Isoelectric Point: 9.5548

>NTDB_id=558777 KCL43_RS04765 WP_165623301.1 1003266..1004576(+) (ciaH) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
MNKLKKELLSDNYTHFFHFFAIFTGIFVVMTIIILQIMRFSVYSTVDSSLISVGQNASNYANRTMARISSFYFDAENNLI
QALPELEASKSLGSSTTNMDIILFSANGTILNSFDAFSNYQSFRLDKSQLNNIVTTQLMNFYGQKEKYHTLTVKVHIKNY
PAVAYMMAVVNVQQLDTANERYEQIIIMVMIVFWLISILASIYLAKWSRKPIMESYAKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILDNSEHIASSLDEVRNMRILTTNLLNLARRDDGIKPQLVDVDAAFFDTVFENYQLVAEESGKQFISAN
QINRPLKTDKALLKQLMTILFDNAIKYTDHNGVVEVKVRTTDKHLLISVIDNGPGIKDDDKKKIFDRFYRVDKARTRQKG
GFGLGLALAQQIVTSLKGTITVSDNKPTGTIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=558777 KCL43_RS04765 WP_165623301.1 1003266..1004576(+) (ciaH) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
ATGAATAAACTAAAAAAAGAATTATTGTCCGATAATTATACACATTTTTTTCATTTCTTTGCTATTTTTACAGGCATTTT
TGTTGTCATGACCATCATTATTTTGCAAATCATGAGGTTTAGTGTCTATTCCACAGTAGACAGCAGTCTCATTTCGGTCG
GTCAAAATGCCAGCAACTATGCTAATAGGACCATGGCGAGAATATCTTCCTTTTATTTTGATGCAGAAAATAACCTTATT
CAGGCTCTTCCTGAACTGGAAGCGTCAAAATCACTTGGCTCCTCCACCACTAATATGGATATTATTTTATTTAGTGCTAA
TGGGACGATATTGAACTCCTTTGACGCTTTCTCTAATTACCAAAGCTTTCGTTTAGACAAAAGCCAGCTCAATAACATTG
TCACCACACAGCTGATGAATTTTTATGGGCAAAAGGAGAAATACCATACCCTAACCGTTAAGGTCCACATCAAAAATTAT
CCGGCAGTGGCTTATATGATGGCAGTGGTTAATGTTCAGCAGCTGGATACTGCTAATGAGCGCTATGAACAGATTATTAT
CATGGTTATGATTGTCTTTTGGTTAATTTCGATTTTGGCCAGTATTTATTTGGCTAAGTGGAGCAGAAAGCCAATTATGG
AGAGCTATGCCAAGCAAAAAATGTTTGTAGAAAATGCCAGTCATGAGCTTAGGACTCCTTTAGCGGTGCTGCAAAATCGT
TTGGAATCGCTGTTTAGAAAGCCTAACGAAACCATTTTAGACAATAGCGAGCATATTGCGTCAAGCCTAGATGAGGTTCG
TAATATGAGAATATTAACAACTAATCTGTTAAATTTAGCCAGACGTGATGATGGGATCAAGCCGCAGCTAGTTGATGTTG
ATGCAGCCTTTTTTGATACTGTTTTTGAAAATTATCAATTAGTTGCAGAAGAGTCAGGCAAGCAGTTTATCTCAGCTAAT
CAGATCAATAGGCCCTTAAAGACGGATAAGGCTTTGCTCAAGCAGCTGATGACCATTTTGTTTGATAATGCGATCAAATA
CACTGATCATAACGGTGTGGTTGAGGTCAAGGTTAGAACGACCGATAAGCATTTATTGATTTCTGTTATTGATAATGGCC
CAGGGATCAAGGATGATGATAAGAAAAAGATTTTTGATCGCTTTTACCGAGTGGATAAGGCAAGGACACGCCAAAAAGGA
GGCTTTGGACTCGGATTGGCCTTAGCGCAGCAGATCGTTACCTCATTAAAAGGAACGATTACCGTCAGTGATAATAAGCC
TACCGGTACCATATTTGAAGTAAAATTATAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(329-436)

His Kinase A (phospho-acceptor) domain (HisKA)

(220-285)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

57.895

100

0.58
  ciaH Streptococcus pneumoniae Rx1

51.606

100

0.516
  ciaH Streptococcus pneumoniae D39

51.606

100

0.516
  ciaH Streptococcus pneumoniae R6

51.606

100

0.516
  ciaH Streptococcus pneumoniae TIGR4

51.606

100

0.516