Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   KCX77_RS02155 Genome accession   NZ_CP073265
Coordinates   443102..444052 (+) Length   316 a.a.
NCBI ID   WP_212064171.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CNY01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 438102..449052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCX77_RS02125 (KCX77_02125) - 438735..439112 (-) 378 Protein_388 ABC transporter permease -
  KCX77_RS20840 - 439109..439201 (+) 93 Protein_389 hypothetical protein -
  KCX77_RS02130 (KCX77_02130) rapC 439395..440543 (+) 1149 WP_004430265.1 tetratricopeptide repeat protein Regulator
  KCX77_RS02135 (KCX77_02135) phrC 440527..440646 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  KCX77_RS02140 (KCX77_02140) - 440780..440887 (-) 108 WP_106273028.1 YjcZ family sporulation protein -
  KCX77_RS02145 (KCX77_02145) - 441091..441198 (-) 108 WP_035192051.1 YjcZ family sporulation protein -
  KCX77_RS02150 (KCX77_02150) - 441305..442669 (-) 1365 WP_004430267.1 aspartate kinase -
  KCX77_RS02155 (KCX77_02155) ceuB 443102..444052 (+) 951 WP_212064171.1 ABC transporter permease Machinery gene
  KCX77_RS02160 (KCX77_02160) - 444045..444992 (+) 948 WP_010789704.1 iron chelate uptake ABC transporter family permease subunit -
  KCX77_RS02165 (KCX77_02165) - 444986..445744 (+) 759 WP_010789703.1 ABC transporter ATP-binding protein -
  KCX77_RS02170 (KCX77_02170) - 445766..446719 (+) 954 WP_004430274.1 siderophore ABC transporter substrate-binding protein -
  KCX77_RS02175 (KCX77_02175) - 447010..448428 (-) 1419 WP_010789702.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34967.50 Da        Isoelectric Point: 9.8731

>NTDB_id=558605 KCX77_RS02155 WP_212064171.1 443102..444052(+) (ceuB) [Bacillus atrophaeus strain CNY01]
MKLRYLVVLLILLAFCSIFIGVEDLSPLDIFHMNKEEASTLFASRLPRLISIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLIKMLIAFIFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNISSWLQGDFSLIVKGRYELLFLSIPLVIIAYVFADKFTVAGMGESFSVNLGLKYKRIVNIGLIISSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLLCDILGRIIIFPYEISIGLMVGIIGSGIFLYMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=558605 KCX77_RS02155 WP_212064171.1 443102..444052(+) (ceuB) [Bacillus atrophaeus strain CNY01]
ATGAAGCTACGTTACTTAGTTGTTTTACTTATTTTACTTGCATTCTGTTCTATTTTTATCGGCGTAGAGGATCTGTCGCC
GCTGGATATTTTTCATATGAATAAAGAAGAGGCTTCAACGCTTTTCGCCAGCCGTTTACCGAGATTAATCAGCATTATTA
TTGCTGGCATGAGCCTGAGCATCTGCGGTTTAATTATGCAGCAGATCAGCCGGAATAAATTCGTTTCGCCGACAACTGCC
GGCACGATGGATTGGGCGAGGCTCGGGATTTTGATTTCATTAATGCTGTTTACCTCTGCCAGTCCGCTGATAAAAATGCT
GATTGCTTTTATATTTGCGCTTGCGGGCAACTTCCTGTTCATGAAAATCCTTGAGAGAATAAAGTTTAATGATACGATCT
TTATTCCTCTCGTGGGCTTAATGCTTGGGAACATTGTCAGCTCGATTGCGACGTTTATCGCGTATAAATATGATTTAATC
CAAAATATTTCTTCATGGCTTCAAGGAGACTTCTCTCTCATTGTGAAAGGGAGATATGAACTTTTATTCTTGAGTATCCC
GCTTGTGATAATCGCATATGTATTTGCTGACAAATTCACAGTAGCAGGGATGGGGGAAAGCTTCTCCGTCAACCTTGGCC
TGAAATATAAACGGATTGTGAATATCGGGCTGATTATATCGTCGCTGATCACGTCCCTCGTGATTTTGACTGTCGGTATG
CTGCCGTTCCTTGGGCTAATCATTCCGAATATCGTATCCATTTACAGGGGAGACAACCTGAAAAGCAGCCTGCCCCACAC
AGCTCTTTTAGGTGCCGTTTTTGTGCTGCTTTGCGATATATTGGGCAGGATTATCATTTTTCCGTACGAAATCTCGATTG
GCTTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTATATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528