Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   L2Z44_RS19040 Genome accession   NZ_CP091333
Coordinates   3964298..3966343 (-) Length   681 a.a.
NCBI ID   WP_072688915.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain DSM30011-VUB     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3959298..3971343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z44_RS19005 (L2Z44_19005) - 3959783..3960463 (+) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -
  L2Z44_RS19010 (L2Z44_19010) - 3960490..3961131 (+) 642 WP_001093907.1 ABC transporter substrate-binding protein -
  L2Z44_RS19015 (L2Z44_19015) - 3961143..3961430 (+) 288 WP_000250997.1 STAS domain-containing protein -
  L2Z44_RS19020 (L2Z44_19020) - 3961500..3962513 (-) 1014 WP_000888321.1 CorA family divalent cation transporter -
  L2Z44_RS19025 (L2Z44_19025) - 3962671..3963251 (+) 581 Protein_3712 TIGR00730 family Rossman fold protein -
  L2Z44_RS19030 (L2Z44_19030) - 3963266..3963667 (+) 402 WP_000849706.1 NUDIX domain-containing protein -
  L2Z44_RS19035 (L2Z44_19035) comF 3963670..3964305 (-) 636 WP_075399905.1 phosphoribosyltransferase family protein Machinery gene
  L2Z44_RS19040 (L2Z44_19040) recG 3964298..3966343 (-) 2046 WP_072688915.1 ATP-dependent DNA helicase RecG Machinery gene
  L2Z44_RS19045 (L2Z44_19045) - 3966364..3967179 (+) 816 WP_000547774.1 NAD(P)H-binding protein -
  L2Z44_RS19050 (L2Z44_19050) adeT2 3967259..3968245 (+) 987 WP_075399906.1 putative multidrug efflux protein AdeT2 -
  L2Z44_RS19055 (L2Z44_19055) plsB 3968289..3970862 (-) 2574 WP_000045404.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76440.05 Da        Isoelectric Point: 7.7343

>NTDB_id=558524 L2Z44_RS19040 WP_072688915.1 3964298..3966343(-) (recG) [Acinetobacter baumannii strain DSM30011-VUB]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLMVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILSDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLHRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=558524 L2Z44_RS19040 WP_072688915.1 3964298..3966343(-) (recG) [Acinetobacter baumannii strain DSM30011-VUB]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTATTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGATGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGTGTAGGTGCACGAGGACTTGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACCC
CCCTTCCAAAAACGCAGCTCACAGCAATTTATCCAAGTACCGATGGACTAACACAAGCTAAATTACGCGAATATGTTAAA
CAAGCGTTGAAACATCATAGTGATGCTTTACCCGAGTTACTCCCTAAACAATATACAAATGGGTATGCACTCAAAGAAGC
TTTACATTACATTCATGAGCCGCCAGTTGATGCCAATATGATCCAACTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGTCAAATTGCTTCACCTGCT
TTTCCGAGTAGTAAAGTGCTTGCAAAAAAACTGCTAGAAGCTTTACCTTTTCAAATGACCAATGCGCAAAAACGTGTATC
AAAAGAAATTTTAAGCGACTTAAAACAACATCAACCTATGCTGCGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGGTTGCAGCATGTCATGCATTGGAAGCAGATTGGCAAGTTGCATTAATGGCACCCACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
GAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCCATGCTGAACTGATTGTGGGTACTCATGCCTTATTTCAAG
ATAACGTTGAATTTGCAAAACTAGGACTCGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAACGATTAGCCTTA
CGCAATAAAGGCGCCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACGCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCAATTATTGATGAATTACCGCCAGGCCGAACTCCAATTCAGACCGTCACGATTCCGC
TAGATCGTCGTGAAGAAGTACTGCATCGAATTGCTTCAAACTGCCGAGAAGGTAAACAAGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCCGCCGAAGCCACCTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCCGATGAAAAACAGGCCGTCATGCAAGCATTTAAAAACAATGAACTACAGC
TGCTAATTGCCACAACCGTTATTGAGGTTGGTGTAGATGTACCCAATGCGTCAATTATGGTCATTGAGAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGTGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATGATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAGTTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAGCGCTGGCTTCCTGAAGCTCCTCGATACGCATATGTTTAA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(466-576)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

RecG wedge domain (RecG_wedge)

(7-163)

DEAD/DEAH box helicase (DEAD)

(261-422)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.925

98.238

0.49
  recG/mmsA Streptococcus pneumoniae R6

41.504

97.651

0.405
  recG/mmsA Streptococcus pneumoniae R36A

41.504

97.651

0.405
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389