Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   KCV09_RS02285 Genome accession   NZ_CP073241
Coordinates   519186..519890 (-) Length   234 a.a.
NCBI ID   WP_004936591.1    Uniprot ID   A0A1P8EI34
Organism   Acinetobacter soli strain M3-1-68     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 514186..524890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCV09_RS02265 - 515286..516605 (+) 1320 WP_004936582.1 adenylosuccinate synthase -
  KCV09_RS02270 - 516715..517026 (+) 312 WP_212515745.1 hypothetical protein -
  KCV09_RS02275 - 517142..517921 (+) 780 WP_004936586.1 M48 family metallopeptidase -
  KCV09_RS02280 - 517975..519021 (-) 1047 WP_151815714.1 NADP(H)-dependent aldo-keto reductase -
  KCV09_RS02285 crp 519186..519890 (-) 705 WP_004936591.1 cAMP-activated global transcriptional regulator CRP Regulator
  KCV09_RS02290 - 520035..520457 (+) 423 WP_004936595.1 OsmC family protein -
  KCV09_RS02295 gigD 520549..521001 (-) 453 WP_212515470.1 Lrp/AsnC family transcriptional regulator GigD -
  KCV09_RS02300 kynU 521149..522399 (+) 1251 WP_076032730.1 kynureninase -
  KCV09_RS02305 - 522438..523850 (+) 1413 WP_076032729.1 amino acid permease -
  KCV09_RS02310 - 523859..524608 (+) 750 WP_151815715.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 26335.88 Da        Isoelectric Point: 4.7318

>NTDB_id=558385 KCV09_RS02285 WP_004936591.1 519186..519890(-) (crp) [Acinetobacter soli strain M3-1-68]
MTSNFSQLSTDALSPGQLPESVKALLKRANINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFESNPQRTAEVRTRDVCEIAEISYDNFHELSKQFPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LASQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEAQNYHDDETDDE

Nucleotide


Download         Length: 705 bp        

>NTDB_id=558385 KCV09_RS02285 WP_004936591.1 519186..519890(-) (crp) [Acinetobacter soli strain M3-1-68]
ATGACATCAAATTTCTCACAACTTAGTACAGATGCTCTATCACCTGGTCAGTTACCTGAATCAGTCAAAGCACTATTAAA
AAGAGCAAACATCAATCGTTATCCTAAACGTACCACGATCGTTGATGCAGGTTCAGAATCTAAGTCTTTATATTTGATTT
TAAAAGGTTCAGTTTCCATTATTTTACGTGAAGATGACGAGCGTGAAATCGTTGTGGCTTATCTCAATCCAGGCGACTTC
TTTGGCGAGATGGGACTGTTCGAATCGAACCCACAACGTACAGCAGAAGTAAGAACGCGTGATGTATGTGAAATTGCTGA
AATCTCTTACGATAATTTTCATGAACTCAGCAAGCAATTTCCAGACTTAAGTTATGCGGTTTTTGCTCAGTTGGTGCGTC
GCCTGAAAAATACCACGCGTAAGGTGACCGATCTTGCGTTTATCGATGTTTCGGGCCGTATTGCACGTTGCCTCATCGAT
CTTGCGAGCCAGCCAGAAGCCATGATTTTACCGAATGGTCGTCAGATTCGAATCACACGCCAGGAAATTGGCCGCATTGT
TGGTTGTTCTCGTGAAATGGTAGGTCGTGTTTTAAAAACGCTTGAAGAGCAAGGCATGATTGAAACCGATGGTAAGGCAA
TCCTGATTTTTGATGCTTCTTTAGAAGCACAAAATTATCACGATGATGAAACTGATGACGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-119)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1P8EI34

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

92.308

100

0.923
  crp Vibrio cholerae strain A1552

48.058

88.034

0.423
  crp Haemophilus influenzae Rd KW20

48.718

83.333

0.406